Annotation Detail for PPP2R2D
Basic Information Top
| Gene Symbol: | PPP2R2D ( MDS026 ) |
|---|---|
| Gene Full Name: | protein phosphatase 2, regulatory subunit B, delta |
| Band: | 10q26.3 |
| Quick Links | Entrez ID:55844; OMIM: NA; Uniprot ID:2ABD_HUMAN; ENSEMBL ID: ENSG00000175470; HGNC ID: 23732 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.380372
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 20 / 564012 | 35 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 66 / 1939121 | 34 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 3 / 12794 | 234 |  |
| bladder carcinoma | 1 / 17475 | 57 |  |
| breast (mammary gland) tumor | 10 / 94178 | 106 | |
| cervical tumor | 3 / 34366 | 87 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 8 / 114246 | 70 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 5 / 71755 | 69 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 104 / 3360307 | 30 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 5 / 104616 | 47 | |
| primitive neuroectodermal tumor of the CNS | 5 / 125680 | 39 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 9 / 124949 | 72 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 3 / 33197 | 90 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 1 / 29757 | 33 | |
| blood | 2 / 123478 | 16 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 6 / 48801 | 122 | |
| brain | 29 / 1100989 | 26 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 7 / 215722 | 32 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 11 / 211054 | 52 | |
| heart | 7 / 89626 | 78 | |
| intestine | 11 / 234472 | 46 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 8 / 336974 | 23 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 17 / 153271 | 110 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 |  |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 3 / 280825 | 10 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 2 / 20155 | 99 | |
| skin | 11 / 210574 | 52 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 16 / 330442 | 48 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 8 / 232878 | 34 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 221772_s_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 6.65 | |
| Adipocyte | 5.2 | |
| AdrenalCortex | 5.45 | |
| Adrenalgland | 4.45 | |
| Amygdala | 5.8 | |
| Appendix | 5.25 | |
| AtrioventricularNode | 3.75 | |
| BDCA4+_DentriticCells | 5.85 | |
| Bonemarrow | 5.1 | |
| BronchialEpithelialCells | 4.9 | |
| CD105+_Endothelial | 5.3 | |
| CD14+_Monocytes | 5.55 | |
| CD19+_BCells(neg._sel.) | 6.45 | |
| CD33+_Myeloid | 6.75 | |
| CD34+ | 9.05 | |
| CD4+_Tcells | 7.05 | |
| CD56+_NKCells | 6.8 | |
| CD71+_EarlyErythroid | 4.9 | |
| CD8+_Tcells | 7.1 | |
| CardiacMyocytes | 6.65 | |
| Caudatenucleus | 4.7 | |
| Cerebellum | 4.6 | |
| CerebellumPeduncles | 5.95 | |
| CiliaryGanglion | 3.6 | |
| CingulateCortex | 5.4 | |
| Colorectaladenocarcinoma | 5.25 | |
| DorsalRootGanglion | 3.35 | |
| FetalThyroid | 5.1 | |
| Fetalbrain | 5.25 | |
| Fetalliver | 4.5 | |
| Fetallung | 4.25 | |
| GlobusPallidus | 3.8 | |
| Heart | 6.65 | |
| Hypothalamus | 5.7 | |
| Kidney | 4.25 | |
| Leukemia_chronicMyelogenousK-562 | 4.75 | |
| Leukemia_promyelocytic-HL-60 | 4.6 | |
| Leukemialymphoblastic(MOLT-4) | 4.2 | |
| Liver | 7.6 | |
| Lung | 8.55 | |
| Lymphnode | 4.5 | |
| Lymphoma_burkitts(Daudi) | 6.95 | |
| Lymphoma_burkitts(Raji) | 7.4 | |
| MedullaOblongata | 4.75 | |
| OccipitalLobe | 4.75 | |
| OlfactoryBulb | 4.1 | |
| Ovary | 3.45 | |
| Pancreas | 4.35 | |
| PancreaticIslet | 6.4 | |
| ParietalLobe | 5.5 | |
| Pituitary | 6.1 | |
| Placenta | 5.5 | |
| Pons | 4.95 | |
| PrefrontalCortex | 6.6 | |
| Prostate | 6.15 | |
| Salivarygland | 4.2 | |
| SkeletalMuscle | 5.95 | |
| Skin | 3.85 | |
| SmoothMuscle | 5.95 | |
| Spinalcord | 5.55 | |
| SubthalamicNucleus | 4.75 | |
| SuperiorCervicalGanglion | 5.7 | |
| TemporalLobe | 4.8 | |
| Testis | 4.5 | |
| TestisGermCell | 4.35 | |
| TestisIntersitial | 4.35 | |
| TestisLeydigCell | 5.15 | |
| TestisSeminiferousTubule | 4.5 | |
| Thalamus | 5.4 | |
| Thymus | 4.95 | |
| Thyroid | 7 | |
| Tongue | 5.05 | |
| Tonsil | 5.1 | |
| Trachea | 4.45 | |
| TrigeminalGanglion | 5 | |
| Uterus | 4.85 | |
| UterusCorpus | 4.7 | |
| WholeBlood | 5.75 | |
| Wholebrain | 8.25 | |
| colon | 5.5 | |
| pineal_day | 6.56 | |
| pineal_night | 6.42 | |
| retina | 6.325 | |
| small_intestine | 5.45 | |
- Probe name: CUST_9304_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.42 ± 1.12 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.66 ± 0.34 | |
| Basal Part of Pons | 3.93 ± 0.68 | |
| Cerebellar Cortex | 4.5 ± 0.32 | |
| Cerebellar Nuclei | 4.08 ± 0.6 | |
| Claustrum | 4.06 ± 0.63 | |
| Epithalamus | 3.5 ± 0.74 | |
| Frontal Lobe | 3.95 ± 0.57 | |
| Globus Pallidus | 3.47 ± 0.57 | |
| Hypothalamus | 3.77 ± 0.82 | |
| Insula | 3.93 ± 0.73 | |
| Limbic Lobe | 3.93 ± 0.57 | |
| Mesencephalon | 4.09 ± 0.76 | |
| Myelencephalon | 3.89 ± 0.7 | |
| Occipital Lobe | 3.72 ± 0.68 | |
| Parietal Lobe | 4.06 ± 0.62 | |
| Pontine Tegmentum | 3.96 ± 0.68 | |
| Striatum | 3.36 ± 0.79 | |
| Subthalamus | 3.87 ± 0.66 | |
| Temporal Lobe | 4 ± 0.63 | |
| Thalamus | 3.81 ± 0.64 | |
| White Matter | 4.04 ± 0.71 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ppp2r2d | CB | Cerebellum | 19.77 | |
| 22.48 | | |||
| Ppp2r2d | CTX | Cerebral cortex | 29.72 | |
| 23.07 | | |||
| Ppp2r2d | HIP | Hippocampal region | 26.07 | |
| 30.9 | | |||
| Ppp2r2d | HPF | Hippocampal formation | 23.42 | |
| 24.66 | | |||
| Ppp2r2d | HY | Hypothalamus | 8.36 | |
| 7.43 | | |||
| Ppp2r2d | LSX | Lateral septal complex | 4.16 | |
| 2.75 | | |||
| Ppp2r2d | MB | Midbrain | 15.12 | |
| 14.89 | | |||
| Ppp2r2d | MY | Medulla | 16.41 | |
| 19.13 | | |||
| Ppp2r2d | OLF | Olfactory bulb | 20.66 | |
| 16.46 | | |||
| Ppp2r2d | P | Pons | 15.61 | |
| 18.4 | | |||
| Ppp2r2d | PAL | Pallidum | 10.31 | |
| 10.75 | | |||
| Ppp2r2d | RHP | Retrohippocampal region | 19.41 | |
| 16.38 | | |||
| Ppp2r2d | sAMY | Striatum-like amygdalar nuclei | 4.3 | |
| 3.02 | | |||
| Ppp2r2d | STR | Striatum | 16.5 | |
| 12.06 | | |||
| Ppp2r2d | STRd | Striatum dorsal region | 18.57 | |
| 13.69 | | |||
| Ppp2r2d | STRv | Striatum ventral region | 21.17 | |
| 14.84 | | |||
| Ppp2r2d | TH | Thalamus | 21.98 | |
| 19.9 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00068115 | 20 | 44 | 63 | GEYNVYSTFQSHEPEFDYLK | Peptide Atlas |