AutismKB 2.0

Annotation Detail for TEX2


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Basic Information Top
Gene Symbol:TEX2 ( DKFZp781G0721,HT008,KIAA1738,TMEM96 )
Gene Full Name: testis expressed 2
Band: 17q23.3
Quick LinksEntrez ID:55852; OMIM: NA; Uniprot ID:TEX2_HUMAN; ENSEMBL ID: ENSG00000136478; HGNC ID: 30884
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst1 / 6231916
fetus26 / 56401246
neonate2 / 3109764
infant0 / 236200 
juvenile1 / 5555617
adult86 / 193912144
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor0 / 343660 
chondrosarcoma5 / 8282360
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor7 / 11936958
germ cell tumor3 / 26384511
glioma2 / 10688318
head and neck tumor12 / 13630288
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor4 / 9635941
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal186 / 336030755
ovarian tumor2 / 7668226
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer9 / 10268087
retinoblastoma0 / 463560 
skin tumor12 / 12494996
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland2 / 3319760
ascites2 / 4001549
bladder1 / 2975733
blood2 / 12347816
bone3 / 7165541
bone marrow0 / 488010 
brain77 / 110098969
cervix0 / 481710 
connective tissue5 / 14925533
ear0 / 162120 
embryonic tissue7 / 21572232
esophagus0 / 202090 
eye10 / 21105447
heart3 / 8962633
intestine7 / 23447229
kidney2 / 2117779
larynx3 / 24145124
liver13 / 20774362
lung10 / 33697429
lymph0 / 442700 
lymph node2 / 9161021
mammary gland4 / 15327126
mouth9 / 67052134
muscle5 / 10771546
nerve0 / 157680 
ovary2 / 10205119
pancreas3 / 21481213
parathyroid2 / 2053997
pharynx1 / 4132824
pituitary gland1 / 1658560
placenta5 / 28082517
prostate12 / 18934563
salivary gland1 / 2015549
skin18 / 21057485
spleen1 / 5395218
stomach4 / 9661941
testis48 / 330442145
thymus1 / 8113112
thyroid1 / 4747321
tonsil0 / 169990 
trachea7 / 52413133
umbilical cord0 / 136800 
uterus7 / 23287830
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 218099_at
Cell line Expression level Expression bar
721_B_lymphoblasts24.4
Adipocyte83.4
AdrenalCortex74.1
Adrenalgland89.05
Amygdala121.85
Appendix38.45
AtrioventricularNode50.25
BDCA4+_DentriticCells286.6
Bonemarrow63.55
BronchialEpithelialCells52.85
CD105+_Endothelial135.1
CD14+_Monocytes33.65
CD19+_BCells(neg._sel.)35.45
CD33+_Myeloid90.15
CD34+150.85
CD4+_Tcells31.65
CD56+_NKCells26
CD71+_EarlyErythroid198.65
CD8+_Tcells22.75
CardiacMyocytes40.75
Caudatenucleus109.25
Cerebellum68.85
CerebellumPeduncles116.15
CiliaryGanglion52.9
CingulateCortex91.35
Colorectaladenocarcinoma57.1
DorsalRootGanglion51.3
FetalThyroid142.05
Fetalbrain66.35
Fetalliver54.65
Fetallung48.05
GlobusPallidus46.5
Heart34.15
Hypothalamus205.55
Kidney49.65
Leukemia_chronicMyelogenousK-56227
Leukemia_promyelocytic-HL-6036.5
Leukemialymphoblastic(MOLT-4)34.95
Liver72.75
Lung73.5
Lymphnode37.45
Lymphoma_burkitts(Daudi)57.45
Lymphoma_burkitts(Raji)17
MedullaOblongata79.9
OccipitalLobe105.75
OlfactoryBulb89.9
Ovary41.6
Pancreas37.45
PancreaticIslet66.7
ParietalLobe88.05
Pituitary78.3
Placenta55.7
Pons65.45
PrefrontalCortex145.4
Prostate65.7
Salivarygland37.5
SkeletalMuscle56.9
Skin39.1
SmoothMuscle72.65
Spinalcord160.7
SubthalamicNucleus61.65
SuperiorCervicalGanglion73.05
TemporalLobe48.55
Testis131.5
TestisGermCell292.75
TestisIntersitial293.25
TestisLeydigCell252.05
TestisSeminiferousTubule285.35
Thalamus99.9
Thymus27.65
Thyroid178.45
Tongue69.85
Tonsil13.3
Trachea41
TrigeminalGanglion65.25
Uterus43.2
UterusCorpus62.15
WholeBlood18.35
Wholebrain103.05
colon52.3
pineal_day205.16
pineal_night157.84
retina552.575
small_intestine36.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6700_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.4 ± 0.44
Basal Forebrain6 ± 0.3
Basal Part of Pons5.93 ± 0.58
Cerebellar Cortex5.8 ± 0.41
Cerebellar Nuclei6.27 ± 0.3
Claustrum7.3 ± 0.48
Epithalamus5.61 ± 0.6
Frontal Lobe5.97 ± 0.51
Globus Pallidus6.8 ± 0.32
Hypothalamus5.62 ± 0.46
Insula5.98 ± 0.36
Limbic Lobe6.46 ± 0.49
Mesencephalon6.23 ± 0.56
Myelencephalon6.09 ± 0.58
Occipital Lobe6.54 ± 0.53
Parietal Lobe6.12 ± 0.52
Pontine Tegmentum6.16 ± 0.38
Striatum6.2 ± 0.47
Subthalamus6.11 ± 0.13
Temporal Lobe6.01 ± 0.46
Thalamus5.85 ± 0.44
White Matter6.95 ± 0.39
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Tex2CBCerebellum82.23
100
Tex2CTXCerebral cortex82.83
70.12
Tex2HIPHippocampal region45.79
57.58
Tex2HPFHippocampal formation55.11
58.15
Tex2HYHypothalamus47.84
37.31
Tex2LSXLateral septal complex40.61
28.5
Tex2MBMidbrain56.38
51.92
Tex2MYMedulla65.14
75.87
Tex2OLFOlfactory bulb94.7
96.66
Tex2PPons57.94
61.58
Tex2PALPallidum45.55
41.48
Tex2RHPRetrohippocampal region71.9
60.7
Tex2sAMYStriatum-like amygdalar nuclei39.94
28.6
Tex2STRStriatum41.55
30.22
Tex2STRdStriatum dorsal region31.41
22.39
Tex2STRvStriatum ventral region80.37
57.73
Tex2THThalamus39.09
36.1
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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