Annotation Detail for CTTNBP2NL
Basic Information Top
| Gene Symbol: | CTTNBP2NL ( DKFZp547A023,FLJ13278 ) |
|---|---|
| Gene Full Name: | CTTNBP2 N-terminal like |
| Band: | 1p13.2 |
| Quick Links | Entrez ID:55917; OMIM: NA; Uniprot ID:CT2NL_HUMAN; ENSEMBL ID: ENSG00000143079; HGNC ID: 25330 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.687503
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 42 / 564012 | 74 |  |
| neonate | 1 / 31097 | 32 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 3 / 55556 | 53 | |
| adult | 115 / 1939121 | 59 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 4 / 34366 | 116 | |
| chondrosarcoma | 6 / 82823 | 72 | |
| colorectal tumor | 8 / 114246 | 70 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 14 / 263845 | 53 | |
| glioma | 8 / 106883 | 74 | |
| head and neck tumor | 17 / 136302 | 124 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 160 / 3360307 | 47 | |
| ovarian tumor | 4 / 76682 | 52 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 3 / 125680 | 23 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 5 / 124949 | 40 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 1 / 123478 | 8 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 52 / 1100989 | 47 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 5 / 149255 | 33 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 9 / 215722 | 41 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 4 / 211054 | 18 | |
| heart | 2 / 89626 | 22 | |
| intestine | 12 / 234472 | 51 | |
| kidney | 12 / 211777 | 56 | |
| larynx | 2 / 24145 | 82 | |
| liver | 13 / 207743 | 62 | |
| lung | 10 / 336974 | 29 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 12 / 67052 | 178 | |
| muscle | 10 / 107715 | 92 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 4 / 214812 | 18 | |
| parathyroid | 3 / 20539 | 146 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 15 / 280825 | 53 | |
| prostate | 9 / 189345 | 47 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 17 / 210574 | 80 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 1 / 96619 | 10 | |
| testis | 11 / 330442 | 33 | |
| thymus | 3 / 81131 | 36 | |
| thyroid | 3 / 47473 | 63 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 5 / 52413 | 95 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 11 / 232878 | 47 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_24_P353740
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.5 ± 0.43 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.24 ± 0.25 | |
| Basal Part of Pons | 4.96 ± 0.28 | |
| Cerebellar Cortex | 4.79 ± 0.35 | |
| Cerebellar Nuclei | 5.55 ± 0.31 | |
| Claustrum | 5.85 ± 0.6 | |
| Epithalamus | 5.06 ± 0.3 | |
| Frontal Lobe | 4.89 ± 0.42 | |
| Globus Pallidus | 5.89 ± 0.38 | |
| Hypothalamus | 4.79 ± 0.4 | |
| Insula | 4.86 ± 0.46 | |
| Limbic Lobe | 5.05 ± 0.45 | |
| Mesencephalon | 5.16 ± 0.48 | |
| Myelencephalon | 5.09 ± 0.5 | |
| Occipital Lobe | 5.42 ± 0.51 | |
| Parietal Lobe | 5.09 ± 0.45 | |
| Pontine Tegmentum | 5.08 ± 0.49 | |
| Striatum | 5.28 ± 0.4 | |
| Subthalamus | 4.85 ± 0.35 | |
| Temporal Lobe | 5.04 ± 0.38 | |
| Thalamus | 5.08 ± 0.39 | |
| White Matter | 6.14 ± 0.43 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Cttnbp2nl | CB | Cerebellum | 55.45 | |
| 99.78 | | |||
| Cttnbp2nl | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Cttnbp2nl | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Cttnbp2nl | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Cttnbp2nl | HY | Hypothalamus | 100 | |
| 100 | | |||
| Cttnbp2nl | LSX | Lateral septal complex | 100 | |
| 100 | | |||
| Cttnbp2nl | MB | Midbrain | 100 | |
| 100 | | |||
| Cttnbp2nl | MY | Medulla | 75.91 | |
| 100 | | |||
| Cttnbp2nl | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Cttnbp2nl | P | Pons | 86.09 | |
| 100 | | |||
| Cttnbp2nl | PAL | Pallidum | 100 | |
| 100 | | |||
| Cttnbp2nl | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Cttnbp2nl | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Cttnbp2nl | STR | Striatum | 100 | |
| 100 | | |||
| Cttnbp2nl | STRd | Striatum dorsal region | 100 | |
| 100 | | |||
| Cttnbp2nl | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| Cttnbp2nl | TH | Thalamus | 100 | |
| 100 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00132609 | 20 | 6 | 25 | LSKPELLTLFSILEGELEAR | Peptide Atlas |