Annotation Detail for DMAP1
Basic Information Top
| Gene Symbol: | DMAP1 ( DKFZp686L09142,DNMAP1,DNMTAP1,EAF2,FLJ11543,KIAA1425,MEAF2,SWC4 ) |
|---|---|
| Gene Full Name: | DNA methyltransferase 1 associated protein 1 |
| Band: | 1p34.1 |
| Quick Links | Entrez ID:55929; OMIM: 605077; Uniprot ID:DMAP1_HUMAN; ENSEMBL ID: ENSG00000178028; HGNC ID: 18291 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.8008
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 27 / 564012 | 47 | |
| neonate | 1 / 31097 | 32 | |
| infant | 4 / 23620 | 169 |  |
| juvenile | 5 / 55556 | 89 | |
| adult | 133 / 1939121 | 68 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 6 / 114246 | 52 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 15 / 263845 | 56 | |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 6 / 136302 | 44 | |
| kidney tumor | 4 / 68959 | 58 | |
| leukemia | 10 / 95842 | 104 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 18 / 71755 | 250 |  |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 241 / 3360307 | 71 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 6 / 104616 | 57 | |
| primitive neuroectodermal tumor of the CNS | 19 / 125680 | 151 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 6 / 33197 | 180 | |
| ascites | 5 / 40015 | 124 | |
| bladder | 1 / 29757 | 33 | |
| blood | 19 / 123478 | 153 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 86 / 1100989 | 78 | |
| cervix | 12 / 48171 | 249 | |
| connective tissue | 1 / 149255 | 6 |  |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 7 / 215722 | 32 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 20 / 211054 | 94 | |
| heart | 3 / 89626 | 33 | |
| intestine | 16 / 234472 | 68 | |
| kidney | 10 / 211777 | 47 | |
| larynx | 1 / 24145 | 41 | |
| liver | 7 / 207743 | 33 | |
| lung | 18 / 336974 | 53 | |
| lymph | 7 / 44270 | 158 | |
| lymph node | 7 / 91610 | 76 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 3 / 67052 | 44 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 7 / 102051 | 68 | |
| pancreas | 16 / 214812 | 74 | |
| parathyroid | 3 / 20539 | 146 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 22 / 280825 | 78 | |
| prostate | 9 / 189345 | 47 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 8 / 210574 | 37 | |
| spleen | 3 / 53952 | 55 | |
| stomach | 3 / 96619 | 31 | |
| testis | 10 / 330442 | 30 | |
| thymus | 3 / 81131 | 36 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 5 / 52413 | 95 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 15 / 232878 | 64 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_23_P388780
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.78 ± 0.4 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.59 ± 0.31 | |
| Basal Part of Pons | 7.07 ± 0.32 | |
| Cerebellar Cortex | 6.93 ± 0.35 | |
| Cerebellar Nuclei | 6.52 ± 0.46 | |
| Claustrum | 6.65 ± 0.41 | |
| Epithalamus | 6.87 ± 0.39 | |
| Frontal Lobe | 6.87 ± 0.35 | |
| Globus Pallidus | 6.53 ± 0.21 | |
| Hypothalamus | 6.54 ± 0.33 | |
| Insula | 6.93 ± 0.33 | |
| Limbic Lobe | 6.84 ± 0.32 | |
| Mesencephalon | 6.7 ± 0.37 | |
| Myelencephalon | 6.76 ± 0.35 | |
| Occipital Lobe | 6.64 ± 0.3 | |
| Parietal Lobe | 6.76 ± 0.34 | |
| Pontine Tegmentum | 6.68 ± 0.33 | |
| Striatum | 6.54 ± 0.31 | |
| Subthalamus | 6.98 ± 0.15 | |
| Temporal Lobe | 6.95 ± 0.34 | |
| Thalamus | 6.73 ± 0.26 | |
| White Matter | 7.05 ± 0.32 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Dmap1 | CB | Cerebellum | 59.87 | |
| 95.72 | | |||
| Dmap1 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Dmap1 | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Dmap1 | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Dmap1 | HY | Hypothalamus | 98.24 | |
| 95.71 | | |||
| Dmap1 | LSX | Lateral septal complex | 79.41 | |
| 61.56 | | |||
| Dmap1 | MB | Midbrain | 95.95 | |
| 100 | | |||
| Dmap1 | MY | Medulla | 96.07 | |
| 100 | | |||
| Dmap1 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Dmap1 | P | Pons | 89.55 | |
| 100 | | |||
| Dmap1 | PAL | Pallidum | 99.43 | |
| 100 | | |||
| Dmap1 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Dmap1 | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Dmap1 | STR | Striatum | 100 | |
| 98.85 | | |||
| Dmap1 | STRd | Striatum dorsal region | 100 | |
| 99.87 | | |||
| Dmap1 | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| Dmap1 | TH | Thalamus | 100 | |
| 100 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00064975 | 19 | 9 | 27 | DILELGGPEGDAASGTISK | Peptide Atlas |