Annotation Detail for ALG1
Basic Information Top
| Gene Symbol: | ALG1 ( CDG1K,HMAT1,HMT-1,HMT1 ) |
|---|---|
| Gene Full Name: | asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae) |
| Band: | 16p13.3 |
| Quick Links | Entrez ID:56052; OMIM: 605907; Uniprot ID:ALG1_HUMAN; ENSEMBL ID: ENSG00000033011; HGNC ID: 18294 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.592086
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 5 / 70761 | 70 |  |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 24 / 564012 | 42 | |
| neonate | 6 / 31097 | 192 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 12 / 55556 | 215 |  |
| adult | 123 / 1939121 | 63 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 8 / 82823 | 96 | |
| colorectal tumor | 9 / 114246 | 78 | |
| esophageal tumor | 2 / 17290 | 115 | |
| gastrointestinal tumor | 10 / 119369 | 83 | |
| germ cell tumor | 37 / 263845 | 140 | |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 7 / 96359 | 72 | |
| lung tumor | 6 / 103127 | 58 | |
| lymphoma | 4 / 71755 | 55 | |
| non-neoplasia | 7 / 97250 | 71 | |
| normal | 223 / 3360307 | 66 | |
| ovarian tumor | 5 / 76682 | 65 | |
| pancreatic tumor | 6 / 104616 | 57 | |
| primitive neuroectodermal tumor of the CNS | 22 / 125680 | 175 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 7 / 90257 | 77 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 4 / 33197 | 120 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 0 / 29757 | 0 | |
| blood | 9 / 123478 | 72 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 77 / 1100989 | 69 | |
| cervix | 5 / 48171 | 103 | |
| connective tissue | 14 / 149255 | 93 | |
| ear | 7 / 16212 | 431 | |
| embryonic tissue | 7 / 215722 | 32 | |
| esophagus | 2 / 20209 | 98 | |
| eye | 11 / 211054 | 52 | |
| heart | 2 / 89626 | 22 | |
| intestine | 17 / 234472 | 72 | |
| kidney | 23 / 211777 | 108 | |
| larynx | 0 / 24145 | 0 | |
| liver | 12 / 207743 | 57 | |
| lung | 19 / 336974 | 56 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 11 / 153271 | 71 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 1 / 107715 | 9 |  |
| nerve | 1 / 15768 | 63 | |
| ovary | 6 / 102051 | 58 | |
| pancreas | 8 / 214812 | 37 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 18 / 280825 | 64 | |
| prostate | 10 / 189345 | 52 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 12 / 210574 | 56 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 7 / 96619 | 72 | |
| testis | 45 / 330442 | 136 | |
| thymus | 5 / 81131 | 61 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 3 / 13680 | 219 | |
| uterus | 12 / 232878 | 51 | |
| vascular | 4 / 51780 | 77 | |
- Probe name: A_23_P66306
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.34 ± 0.21 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.27 ± 0.14 | |
| Basal Part of Pons | 8.53 ± 0.21 | |
| Cerebellar Cortex | 8.19 ± 0.17 | |
| Cerebellar Nuclei | 8.46 ± 0.14 | |
| Claustrum | 8.28 ± 0.26 | |
| Epithalamus | 8.08 ± 0.16 | |
| Frontal Lobe | 8.32 ± 0.25 | |
| Globus Pallidus | 8.21 ± 0.22 | |
| Hypothalamus | 8.37 ± 0.16 | |
| Insula | 8.31 ± 0.17 | |
| Limbic Lobe | 8.37 ± 0.22 | |
| Mesencephalon | 8.24 ± 0.31 | |
| Myelencephalon | 8.3 ± 0.22 | |
| Occipital Lobe | 8.38 ± 0.24 | |
| Parietal Lobe | 8.34 ± 0.21 | |
| Pontine Tegmentum | 8.24 ± 0.2 | |
| Striatum | 8.39 ± 0.2 | |
| Subthalamus | 8.35 ± 0.1 | |
| Temporal Lobe | 8.3 ± 0.2 | |
| Thalamus | 8.29 ± 0.17 | |
| White Matter | 8.19 ± 0.25 | |
Mouse Brain ISH 
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00095842 | 21 | 302 | 322 | FEQLTLDGHNLPSLVCVITGK | Peptide Atlas |