Annotation Detail for PCDHA2
Basic Information Top
| Gene Symbol: | PCDHA2 ( PCDH-ALPHA2 ) |
|---|---|
| Gene Full Name: | protocadherin alpha 2 |
| Band: | 5q31.3 |
| Quick Links | Entrez ID:56146; OMIM: 606308; Uniprot ID:PCDA2_HUMAN; ENSEMBL ID: ENSG00000081842,ENSG00000204969,ENSG00000239389,EN; HGNC ID: 8668 |
| Relate to Another Database: | SFARIGene; denovo-db |
Unigene EST- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 210674_s_at
| Cell line | Expression level | Expression bar |
|---|---|---|
 | ||
| 721_B_lymphoblasts | 7.2 |  |
| Adipocyte | 6.8 | |
| AdrenalCortex | 7.9 | |
| Adrenalgland | 6.15 | |
| Amygdala | 216.2 |  |
| Appendix | 7.6 | |
| AtrioventricularNode | 11.55 |  |
| BDCA4+_DentriticCells | 6.4 | |
| Bonemarrow | 7.25 | |
| BronchialEpithelialCells | 6.4 | |
| CD105+_Endothelial | 6.55 | |
| CD14+_Monocytes | 6.9 | |
| CD19+_BCells(neg._sel.) | 6.95 | |
| CD33+_Myeloid | 7.95 | |
| CD34+ | 7.95 | |
| CD4+_Tcells | 6.5 | |
| CD56+_NKCells | 7.3 | |
| CD71+_EarlyErythroid | 6.45 | |
| CD8+_Tcells | 5.85 | |
| CardiacMyocytes | 10.25 | |
| Caudatenucleus | 45.5 | |
| Cerebellum | 50.15 |  |
| CerebellumPeduncles | 84.7 | |
| CiliaryGanglion | 13.15 | |
| CingulateCortex | 53.15 | |
| Colorectaladenocarcinoma | 6.7 | |
| DorsalRootGanglion | 11.75 | |
| FetalThyroid | 6.45 | |
| Fetalbrain | 413.55 | |
| Fetalliver | 6.1 | |
| Fetallung | 5.5 | |
| GlobusPallidus | 24.5 | |
| Heart | 10.25 | |
| Hypothalamus | 45.55 | |
| Kidney | 6.1 | |
| Leukemia_chronicMyelogenousK-562 | 6.1 | |
| Leukemia_promyelocytic-HL-60 | 5.9 | |
| Leukemialymphoblastic(MOLT-4) | 5 | |
| Liver | 9.8 | |
| Lung | 7.65 | |
| Lymphnode | 5.6 | |
| Lymphoma_burkitts(Daudi) | 9.15 | |
| Lymphoma_burkitts(Raji) | 10.2 | |
| MedullaOblongata | 24.3 | |
| OccipitalLobe | 53.65 | |
| OlfactoryBulb | 5.55 | |
| Ovary | 4.75 | |
| Pancreas | 5.45 | |
| PancreaticIslet | 8.95 | |
| ParietalLobe | 23.7 | |
| Pituitary | 40.1 | |
| Placenta | 6.6 | |
| Pons | 11.85 | |
| PrefrontalCortex | 61.5 | |
| Prostate | 7.8 | |
| Salivarygland | 5.45 | |
| SkeletalMuscle | 9.05 | |
| Skin | 6.5 | |
| SmoothMuscle | 7.25 | |
| Spinalcord | 37.85 | |
| SubthalamicNucleus | 52.95 | |
| SuperiorCervicalGanglion | 11.85 | |
| TemporalLobe | 23.4 | |
| Testis | 7.65 | |
| TestisGermCell | 7.15 | |
| TestisIntersitial | 6.25 | |
| TestisLeydigCell | 6.75 | |
| TestisSeminiferousTubule | 5.8 | |
| Thalamus | 39.1 | |
| Thymus | 5 | |
| Thyroid | 10.35 | |
| Tongue | 7.35 | |
| Tonsil | 6.85 | |
| Trachea | 5.65 | |
| TrigeminalGanglion | 19.25 | |
| Uterus | 6.45 | |
| UterusCorpus | 6.9 | |
| WholeBlood | 7.1 | |
| Wholebrain | 94.15 | |
| colon | 6.45 | |
| pineal_day | 142.4 | |
| pineal_night | 150.78 | |
| retina | 23.525 | |
| small_intestine | 6.35 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Pcdha2 | CB | Cerebellum | 1.68 | |
| 1.72 | | |||
| Pcdha2 | CTX | Cerebral cortex | 0.4 | |
| 0.59 | | |||
| Pcdha2 | HIP | Hippocampal region | 0.51 | |
| 0.64 | | |||
| Pcdha2 | HPF | Hippocampal formation | 0.46 | |
| 0.56 | | |||
| Pcdha2 | HY | Hypothalamus | 0.06 | |
| 0.18 | | |||
| Pcdha2 | LSX | Lateral septal complex | 0.03 | |
| 0 | | |||
| Pcdha2 | MB | Midbrain | 0.22 | |
| 0.35 | | |||
| Pcdha2 | MY | Medulla | 0.13 | |
| 0.14 | | |||
| Pcdha2 | OLF | Olfactory bulb | 0.15 | |
| 0.19 | | |||
| Pcdha2 | P | Pons | 0.41 | |
| 0.59 | | |||
| Pcdha2 | PAL | Pallidum | 0.04 | |
| 0.06 | | |||
| Pcdha2 | RHP | Retrohippocampal region | 0.36 | |
| 0.35 | | |||
| Pcdha2 | sAMY | Striatum-like amygdalar nuclei | 0.26 | |
| 0.27 | | |||
| Pcdha2 | STR | Striatum | 0.11 | |
| 0.17 | | |||
| Pcdha2 | STRd | Striatum dorsal region | 0.09 | |
| 0.17 | | |||
| Pcdha2 | STRv | Striatum ventral region | 0.14 | |
| 0.21 | | |||
| Pcdha2 | TH | Thalamus | 0.09 | |
| 0.08 | |