AutismKB 2.0

Annotation Detail for YLPM1


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Basic Information Top
Gene Symbol:YLPM1 ( C14orf170,ZAP,ZAP3 )
Gene Full Name: YLP motif containing 1
Band: 14q24.3
Quick LinksEntrez ID:56252; OMIM: NA; Uniprot ID:YLPM1_HUMAN; ENSEMBL ID: ENSG00000119596; HGNC ID: 17798
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst4 / 6231964
fetus51 / 56401290
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult324 / 1939121167
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma3 / 17475171
breast (mammary gland) tumor8 / 9417884
cervical tumor5 / 34366145
chondrosarcoma9 / 82823108
colorectal tumor51 / 114246446
esophageal tumor0 / 172900 
gastrointestinal tumor12 / 119369100
germ cell tumor26 / 26384598
glioma7 / 10688365
head and neck tumor150 / 1363021100
kidney tumor3 / 6895943
leukemia6 / 9584262
liver tumor2 / 9635920
lung tumor5 / 10312748
lymphoma2 / 7175527
non-neoplasia3 / 9725030
normal207 / 336030761
ovarian tumor11 / 76682143
pancreatic tumor4 / 10461638
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer8 / 10268077
retinoblastoma2 / 4635643
skin tumor8 / 12494964
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor8 / 9025788
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites3 / 4001574
bladder4 / 29757134
blood3 / 12347824
bone4 / 7165555
bone marrow1 / 4880120
brain64 / 110098958
cervix5 / 48171103
connective tissue12 / 14925580
ear0 / 162120 
embryonic tissue7 / 21572232
esophagus0 / 202090 
eye7 / 21105433
heart6 / 8962666
intestine60 / 234472255
kidney13 / 21177761
larynx136 / 241455632
liver5 / 20774324
lung19 / 33697456
lymph1 / 4427022
lymph node15 / 91610163
mammary gland14 / 15327191
mouth5 / 6705274
muscle4 / 10771537
nerve0 / 157680 
ovary11 / 102051107
pancreas9 / 21481241
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta11 / 28082539
prostate19 / 189345100
salivary gland0 / 201550 
skin16 / 21057475
spleen2 / 5395237
stomach10 / 96619103
testis24 / 33044272
thymus6 / 8113173
thyroid10 / 47473210
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus14 / 23287860
vascular4 / 5178077
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212787_at
Cell line Expression level Expression bar
721_B_lymphoblasts208.55
Adipocyte88
AdrenalCortex90.45
Adrenalgland93.1
Amygdala163.4
Appendix97.95
AtrioventricularNode62.55
BDCA4+_DentriticCells171.3
Bonemarrow74.15
BronchialEpithelialCells89.2
CD105+_Endothelial121.75
CD14+_Monocytes69.95
CD19+_BCells(neg._sel.)102.2
CD33+_Myeloid129.85
CD34+245.55
CD4+_Tcells191.6
CD56+_NKCells92.8
CD71+_EarlyErythroid54.2
CD8+_Tcells153.8
CardiacMyocytes104.65
Caudatenucleus130.85
Cerebellum158.8
CerebellumPeduncles135.6
CiliaryGanglion65.25
CingulateCortex135.75
Colorectaladenocarcinoma135.4
DorsalRootGanglion82
FetalThyroid99.7
Fetalbrain275.35
Fetalliver73.55
Fetallung82.75
GlobusPallidus64.9
Heart97.55
Hypothalamus199.95
Kidney62.35
Leukemia_chronicMyelogenousK-56293.3
Leukemia_promyelocytic-HL-6097.75
Leukemialymphoblastic(MOLT-4)207.5
Liver74.15
Lung95.25
Lymphnode98.75
Lymphoma_burkitts(Daudi)207.75
Lymphoma_burkitts(Raji)119.2
MedullaOblongata103.25
OccipitalLobe158.7
OlfactoryBulb107.5
Ovary78.05
Pancreas67.4
PancreaticIslet116.5
ParietalLobe105.15
Pituitary143.85
Placenta149.2
Pons87.65
PrefrontalCortex265.8
Prostate107.95
Salivarygland58.95
SkeletalMuscle85.1
Skin68.15
SmoothMuscle147.35
Spinalcord126.9
SubthalamicNucleus97.85
SuperiorCervicalGanglion146.35
TemporalLobe69.05
Testis270.25
TestisGermCell188.35
TestisIntersitial163.5
TestisLeydigCell172.1
TestisSeminiferousTubule194.4
Thalamus116.65
Thymus181.4
Thyroid110.5
Tongue78.8
Tonsil89.8
Trachea70.05
TrigeminalGanglion86.6
Uterus102.8
UterusCorpus72.45
WholeBlood93.55
Wholebrain159.05
colon86
pineal_day286.86
pineal_night281.74
retina194.85
small_intestine74.45
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P3128
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.86 ± 0.2
Basal Forebrain8.8 ± 0.27
Basal Part of Pons8.52 ± 0.25
Cerebellar Cortex8.57 ± 0.32
Cerebellar Nuclei8.45 ± 0.21
Claustrum9.03 ± 0.44
Epithalamus8.45 ± 0.2
Frontal Lobe8.53 ± 0.32
Globus Pallidus8.74 ± 0.29
Hypothalamus8.58 ± 0.31
Insula8.61 ± 0.22
Limbic Lobe8.6 ± 0.3
Mesencephalon8.52 ± 0.32
Myelencephalon8.52 ± 0.3
Occipital Lobe8.44 ± 0.21
Parietal Lobe8.63 ± 0.38
Pontine Tegmentum8.6 ± 0.33
Striatum8.5 ± 0.28
Subthalamus8.38 ± 0.21
Temporal Lobe8.67 ± 0.3
Thalamus8.49 ± 0.23
White Matter9.19 ± 0.32
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Ylpm1CBCerebellum22.03
22.32
Ylpm1CTXCerebral cortex91.1
68.4
Ylpm1HIPHippocampal region54.81
88.86
Ylpm1HPFHippocampal formation61.53
77.07
Ylpm1HYHypothalamus66.02
49.17
Ylpm1LSXLateral septal complex91.19
68.16
Ylpm1MBMidbrain53.71
45.62
Ylpm1MYMedulla57.27
55.33
Ylpm1OLFOlfactory bulb87.63
73.26
Ylpm1PPons50.03
46.31
Ylpm1PALPallidum59.67
50.33
Ylpm1RHPRetrohippocampal region75.18
64.1
Ylpm1sAMYStriatum-like amygdalar nuclei89.41
66.55
Ylpm1STRStriatum87.91
64.24
Ylpm1STRdStriatum dorsal region84.16
61.48
Ylpm1STRvStriatum ventral region100
73.71
Ylpm1THThalamus61.15
47.66
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00133847 16 382 397 QLQAAAAHWQQHQQHR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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