Annotation Detail for RNF20
Basic Information Top
| Gene Symbol: | RNF20 ( BRE1,BRE1A,FLJ11189,FLJ20382,KIAA2779,MGC129667,MGC129668,hBRE1 ) |
|---|---|
| Gene Full Name: | ring finger protein 20 |
| Band: | 9q31.1 |
| Quick Links | Entrez ID:56254; OMIM: 607699; Uniprot ID:BRE1A_HUMAN; ENSEMBL ID: ENSG00000155827; HGNC ID: 10062 |
| Relate to Another Database: | SFARIGene; denovo-db |
Unigene EST- Probe name: CUST_14248_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.85 ± 0.51 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.69 ± 0.28 | |
| Basal Part of Pons | 6.63 ± 0.41 | |
| Cerebellar Cortex | 6.38 ± 0.38 | |
| Cerebellar Nuclei | 6.75 ± 0.35 | |
| Claustrum | 6.96 ± 0.49 | |
| Epithalamus | 6.99 ± 0.36 | |
| Frontal Lobe | 6.52 ± 0.42 | |
| Globus Pallidus | 7.4 ± 0.24 | |
| Hypothalamus | 6.47 ± 0.55 | |
| Insula | 6.48 ± 0.47 | |
| Limbic Lobe | 6.66 ± 0.41 | |
| Mesencephalon | 6.77 ± 0.41 | |
| Myelencephalon | 6.64 ± 0.41 | |
| Occipital Lobe | 6.79 ± 0.42 | |
| Parietal Lobe | 6.67 ± 0.42 | |
| Pontine Tegmentum | 6.6 ± 0.41 | |
| Striatum | 6.75 ± 0.38 | |
| Subthalamus | 6.86 ± 0.24 | |
| Temporal Lobe | 6.53 ± 0.4 | |
| Thalamus | 6.72 ± 0.33 | |
| White Matter | 7.42 ± 0.46 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Rnf20 | CB | Cerebellum | 3.28 |  |
| 3.29 | | |||
| Rnf20 | CTX | Cerebral cortex | 2.35 | |
| 1.56 | | |||
| Rnf20 | HIP | Hippocampal region | 2.56 | |
| 2.12 | | |||
| Rnf20 | HPF | Hippocampal formation | 2.18 | |
| 1.64 | | |||
| Rnf20 | HY | Hypothalamus | 0.09 | |
| 0.05 | | |||
| Rnf20 | LSX | Lateral septal complex | 0.62 | |
| 0.36 | | |||
| Rnf20 | MB | Midbrain | 0.41 | |
| 0.34 | | |||
| Rnf20 | MY | Medulla | 2.18 | |
| 2.11 | | |||
| Rnf20 | OLF | Olfactory bulb | 3.68 | |
| 2.88 | | |||
| Rnf20 | P | Pons | 0.89 | |
| 1.11 | | |||
| Rnf20 | PAL | Pallidum | 0.36 | |
| 0.24 | | |||
| Rnf20 | RHP | Retrohippocampal region | 1.57 | |
| 0.99 | | |||
| Rnf20 | sAMY | Striatum-like amygdalar nuclei | 0.37 | |
| 0.23 | | |||
| Rnf20 | STR | Striatum | 0.45 | |
| 0.29 | | |||
| Rnf20 | STRd | Striatum dorsal region | 0.23 | |
| 0.16 | | |||
| Rnf20 | STRv | Striatum ventral region | 1.25 | |
| 0.76 | | |||
| Rnf20 | TH | Thalamus | 1.06 | |
| 0.67 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| BRE1A_HUMAN_2 | 7 | 2 | 8 | SGIGNKR | PRIDE |
| PAp00001215 | 12 | 960 | 971 | CNAAFGANDFHR | Peptide Atlas |