Annotation Detail for GRIPAP1
Basic Information Top
| Gene Symbol: | GRIPAP1 ( DKFZp434P0630,GRASP-1,KIAA1167,MGC126593,MGC126595 ) |
|---|---|
| Gene Full Name: | GRIP1 associated protein 1 |
| Band: | Xp11.23 |
| Quick Links | Entrez ID:56850; OMIM: 300408; Uniprot ID:GRAP1_HUMAN; ENSEMBL ID: ENSG00000068400; HGNC ID: 18706 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.109929
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 7 / 62319 | 112 |  |
| fetus | 18 / 564012 | 31 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 84 / 1939121 | 43 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 8 / 94178 | 84 | |
| cervical tumor | 3 / 34366 | 87 | |
| chondrosarcoma | 10 / 82823 | 120 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 7 / 136302 | 51 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 10 / 95842 | 104 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 1 / 97250 | 10 |  |
| normal | 99 / 3360307 | 29 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 16 / 124949 | 128 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 8 / 123478 | 64 | |
| bone | 7 / 71655 | 97 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 30 / 1100989 | 27 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 5 / 149255 | 33 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 15 / 215722 | 69 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 8 / 211054 | 37 | |
| heart | 2 / 89626 | 22 | |
| intestine | 7 / 234472 | 29 | |
| kidney | 6 / 211777 | 28 | |
| larynx | 2 / 24145 | 82 | |
| liver | 6 / 207743 | 28 | |
| lung | 12 / 336974 | 35 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 8 / 153271 | 52 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 9 / 107715 | 83 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 8 / 214812 | 37 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 5 / 280825 | 17 | |
| prostate | 7 / 189345 | 36 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 19 / 210574 | 90 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 7 / 330442 | 21 | |
| thymus | 7 / 81131 | 86 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P45251
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.79 ± 0.42 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.37 ± 0.33 | |
| Basal Part of Pons | 8.32 ± 0.24 | |
| Cerebellar Cortex | 8.18 ± 0.23 | |
| Cerebellar Nuclei | 8.12 ± 0.27 | |
| Claustrum | 8.85 ± 0.6 | |
| Epithalamus | 7.65 ± 0.42 | |
| Frontal Lobe | 8.19 ± 0.35 | |
| Globus Pallidus | 8.46 ± 0.21 | |
| Hypothalamus | 8.02 ± 0.41 | |
| Insula | 8.2 ± 0.43 | |
| Limbic Lobe | 8.63 ± 0.43 | |
| Mesencephalon | 8.46 ± 0.43 | |
| Myelencephalon | 8.36 ± 0.4 | |
| Occipital Lobe | 8.7 ± 0.42 | |
| Parietal Lobe | 8.42 ± 0.42 | |
| Pontine Tegmentum | 8.28 ± 0.32 | |
| Striatum | 8.69 ± 0.49 | |
| Subthalamus | 8.13 ± 0.34 | |
| Temporal Lobe | 8.33 ± 0.35 | |
| Thalamus | 8.29 ± 0.34 | |
| White Matter | 7.96 ± 0.44 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Gripap1 | CB | Cerebellum | 44.48 | |
| 55.04 | | |||
| Gripap1 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Gripap1 | HIP | Hippocampal region | 74.25 | |
| 100 | | |||
| Gripap1 | HPF | Hippocampal formation | 84.85 | |
| 100 | | |||
| Gripap1 | HY | Hypothalamus | 35.86 | |
| 34.37 | | |||
| Gripap1 | LSX | Lateral septal complex | 25.1 | |
| 21.05 | | |||
| Gripap1 | MB | Midbrain | 40.68 | |
| 42.83 | | |||
| Gripap1 | MY | Medulla | 55.56 | |
| 69.14 | | |||
| Gripap1 | OLF | Olfactory bulb | 86.9 | |
| 82.62 | | |||
| Gripap1 | P | Pons | 43.97 | |
| 55.1 | | |||
| Gripap1 | PAL | Pallidum | 50.92 | |
| 53.43 | | |||
| Gripap1 | RHP | Retrohippocampal region | 100 | |
| 98.63 | | |||
| Gripap1 | sAMY | Striatum-like amygdalar nuclei | 87.93 | |
| 75.61 | | |||
| Gripap1 | STR | Striatum | 100 | |
| 100 | | |||
| Gripap1 | STRd | Striatum dorsal region | 100 | |
| 100 | | |||
| Gripap1 | STRv | Striatum ventral region | 100 | |
| 94.55 | | |||
| Gripap1 | TH | Thalamus | 55.29 | |
| 54.39 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| GRAP1_HUMAN_0 | 0 | 0 | 0 | IDVSVAAGHTDR | PRIDE |
| GRAP1_HUMAN_2 | 11 | 2 | 12 | AQALSEEEFQR | PRIDE |
| PAp00073393 | 12 | 348 | 359 | LLEQLQEIGQEK | Peptide Atlas |