AutismKB 2.0

Annotation Detail for C15orf24


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Basic Information Top
Gene Symbol:C15orf24 ( C11orf3,ORF1-FL1 )
Gene Full Name: chromosome 15 open reading frame 24
Band: 15q14
Quick LinksEntrez ID:56851; OMIM: NA; Uniprot ID:CO024_HUMAN; ENSEMBL ID: ENSG00000134153; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst2 / 6231932
fetus42 / 56401274
neonate0 / 310970 
infant1 / 2362042
juvenile3 / 5555653
adult142 / 193912173
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma16 / 82823193
colorectal tumor5 / 11424643
esophageal tumor0 / 172900 
gastrointestinal tumor3 / 11936925
germ cell tumor6 / 26384522
glioma7 / 10688365
head and neck tumor12 / 13630288
kidney tumor0 / 689590 
leukemia5 / 9584252
liver tumor5 / 9635951
lung tumor3 / 10312729
lymphoma2 / 7175527
non-neoplasia1 / 9725010
normal206 / 336030761
ovarian tumor8 / 76682104
pancreatic tumor4 / 10461638
primitive neuroectodermal tumor of the CNS6 / 12568047
prostate cancer16 / 102680155
retinoblastoma1 / 4635621
skin tumor3 / 12494924
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor4 / 9025744
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland2 / 3319760
ascites2 / 4001549
bladder1 / 2975733
blood9 / 12347872
bone10 / 71655139
bone marrow2 / 4880140
brain59 / 110098953
cervix2 / 4817141
connective tissue5 / 14925533
ear0 / 162120 
embryonic tissue3 / 21572213
esophagus0 / 202090 
eye7 / 21105433
heart10 / 89626111
intestine10 / 23447242
kidney11 / 21177751
larynx9 / 24145372
liver9 / 20774343
lung39 / 336974115
lymph0 / 442700 
lymph node11 / 91610120
mammary gland6 / 15327139
mouth0 / 670520 
muscle10 / 10771592
nerve1 / 1576863
ovary9 / 10205188
pancreas15 / 21481269
parathyroid3 / 20539146
pharynx1 / 4132824
pituitary gland4 / 16585241
placenta27 / 28082596
prostate22 / 189345116
salivary gland0 / 201550 
skin7 / 21057433
spleen0 / 539520 
stomach0 / 966190 
testis13 / 33044239
thymus3 / 8113136
thyroid4 / 4747384
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus12 / 23287851
vascular4 / 5178077
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 217898_at
Cell line Expression level Expression bar
721_B_lymphoblasts391.1
Adipocyte306.4
AdrenalCortex77.95
Adrenalgland124.65
Amygdala359.9
Appendix47.25
AtrioventricularNode29.55
BDCA4+_DentriticCells595.25
Bonemarrow76.2
BronchialEpithelialCells517.55
CD105+_Endothelial331.7
CD14+_Monocytes420.2
CD19+_BCells(neg._sel.)473.7
CD33+_Myeloid384.25
CD34+340.4
CD4+_Tcells128.15
CD56+_NKCells531.2
CD71+_EarlyErythroid189
CD8+_Tcells149.95
CardiacMyocytes224.05
Caudatenucleus143.1
Cerebellum114.75
CerebellumPeduncles112.45
CiliaryGanglion26.2
CingulateCortex146.35
Colorectaladenocarcinoma93.4
DorsalRootGanglion84.3
FetalThyroid111.3
Fetalbrain62.95
Fetalliver54.15
Fetallung196
GlobusPallidus66.4
Heart68.75
Hypothalamus633.5
Kidney106.35
Leukemia_chronicMyelogenousK-562136
Leukemia_promyelocytic-HL-60159.8
Leukemialymphoblastic(MOLT-4)87.85
Liver108.7
Lung281.6
Lymphnode133.25
Lymphoma_burkitts(Daudi)55.3
Lymphoma_burkitts(Raji)69.65
MedullaOblongata122.45
OccipitalLobe220.45
OlfactoryBulb334.75
Ovary32.2
Pancreas97.05
PancreaticIslet500.25
ParietalLobe104.35
Pituitary277.8
Placenta719.95
Pons56.7
PrefrontalCortex254.5
Prostate228.15
Salivarygland101.1
SkeletalMuscle48.5
Skin35.25
SmoothMuscle517.5
Spinalcord278.85
SubthalamicNucleus74.9
SuperiorCervicalGanglion30.05
TemporalLobe97.5
Testis398.3
TestisGermCell505.05
TestisIntersitial322.65
TestisLeydigCell208.1
TestisSeminiferousTubule222.65
Thalamus265.1
Thymus113
Thyroid312.25
Tongue45
Tonsil41.65
Trachea82.4
TrigeminalGanglion27.8
Uterus117.65
UterusCorpus127.4
WholeBlood320.55
Wholebrain425.4
colon357.4
pineal_day777.76
pineal_night779.84
retina374.4
small_intestine320
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_10227_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.23 ± 0.46
Basal Forebrain8.56 ± 0.3
Basal Part of Pons8.68 ± 0.5
Cerebellar Cortex8.54 ± 0.45
Cerebellar Nuclei8.84 ± 0.34
Claustrum7.75 ± 0.8
Epithalamus8.72 ± 0.34
Frontal Lobe8.8 ± 0.42
Globus Pallidus8.93 ± 0.34
Hypothalamus9.21 ± 0.29
Insula8.75 ± 0.41
Limbic Lobe8.22 ± 0.67
Mesencephalon8.6 ± 0.42
Myelencephalon8.52 ± 0.55
Occipital Lobe8.01 ± 0.5
Parietal Lobe8.48 ± 0.49
Pontine Tegmentum8.6 ± 0.46
Striatum8.38 ± 0.36
Subthalamus8.77 ± 0.46
Temporal Lobe8.64 ± 0.49
Thalamus8.62 ± 0.37
White Matter8.97 ± 0.67
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
2900064A13RikCBCerebellum20.45
47.32
2900064A13RikCTXCerebral cortex16.77
12.68
2900064A13RikHIPHippocampal region9.78
10.2
2900064A13RikHPFHippocampal formation11.57
10.6
2900064A13RikHYHypothalamus3.94
4
2900064A13RikLSXLateral septal complex1.29
0.95
2900064A13RikMBMidbrain4.49
4.45
2900064A13RikMYMedulla10.01
11.05
2900064A13RikOLFOlfactory bulb15
10.8
2900064A13RikPPons6.63
7.18
2900064A13RikPALPallidum7.26
6.2
2900064A13RikRHPRetrohippocampal region16.43
12.43
2900064A13RiksAMYStriatum-like amygdalar nuclei5.48
4.07
2900064A13RikSTRStriatum7.36
6.22
2900064A13RikSTRdStriatum dorsal region7.91
7.15
2900064A13RikSTRvStriatum ventral region10.17
6.6
2900064A13RikTHThalamus9.58
8.97
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00007640 25 80 104 TDGSFVVHDIPSGSYVVEVVSPAYR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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