Annotation Detail for CELF4
Basic Information Top
| Gene Symbol: | CELF4 ( BRUNOL-4,BRUNOL4 ) |
|---|---|
| Gene Full Name: | CUGBP, Elav-like family member 4 |
| Band: | 18q12.2 |
| Quick Links | Entrez ID:56853; OMIM: 612679; Uniprot ID:CELF4_HUMAN; ENSEMBL ID: ENSG00000101489; HGNC ID: 14015 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.435976
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 44 / 564012 | 78 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 |  |
| juvenile | 1 / 55556 | 17 | |
| adult | 48 / 1939121 | 24 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 15 / 263845 | 56 | |
| glioma | 6 / 106883 | 56 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 4 / 68959 | 58 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 11 / 103127 | 106 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 198 / 3360307 | 58 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 1 / 104616 | 9 |  |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 199 / 1100989 | 180 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 18 / 211054 | 85 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 40 / 336974 | 118 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 10 / 214812 | 46 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 4 / 16585 | 241 |  |
| placenta | 0 / 280825 | 0 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 0 / 96619 | 0 | |
| testis | 2 / 330442 | 6 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P96249
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 9.89 ± 0.64 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 9.39 ± 0.46 | |
| Basal Part of Pons | 10.08 ± 0.35 | |
| Cerebellar Cortex | 9.9 ± 0.36 | |
| Cerebellar Nuclei | 8.58 ± 0.72 | |
| Claustrum | 10.07 ± 0.38 | |
| Epithalamus | 8.93 ± 0.83 | |
| Frontal Lobe | 9.85 ± 0.51 | |
| Globus Pallidus | 7.48 ± 0.8 | |
| Hypothalamus | 9.9 ± 0.76 | |
| Insula | 10.05 ± 0.2 | |
| Limbic Lobe | 9.87 ± 0.58 | |
| Mesencephalon | 9.49 ± 0.74 | |
| Myelencephalon | 9.58 ± 0.78 | |
| Occipital Lobe | 8.97 ± 0.81 | |
| Parietal Lobe | 9.67 ± 0.53 | |
| Pontine Tegmentum | 9.48 ± 0.8 | |
| Striatum | 9.09 ± 0.68 | |
| Subthalamus | 9.84 ± 0.41 | |
| Temporal Lobe | 10.1 ± 0.46 | |
| Thalamus | 9.4 ± 0.43 | |
| White Matter | 7.17 ± 0.4 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Brunol4 | CB | Cerebellum | 100 | |
| 100 | | |||
| Brunol4 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Brunol4 | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Brunol4 | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Brunol4 | HY | Hypothalamus | 100 | |
| 100 | | |||
| Brunol4 | LSX | Lateral septal complex | 100 | |
| 100 | | |||
| Brunol4 | MB | Midbrain | 100 | |
| 100 | | |||
| Brunol4 | MY | Medulla | 92.02 | |
| 100 | | |||
| Brunol4 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Brunol4 | P | Pons | 96 | |
| 100 | | |||
| Brunol4 | PAL | Pallidum | 100 | |
| 100 | | |||
| Brunol4 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Brunol4 | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Brunol4 | STR | Striatum | 100 | |
| 100 | | |||
| Brunol4 | STRd | Striatum dorsal region | 100 | |
| 100 | | |||
| Brunol4 | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| Brunol4 | TH | Thalamus | 94.77 | |
| 100 | |