Annotation Detail for WRNIP1
Basic Information Top
| Gene Symbol: | WRNIP1 ( FLJ22526,RP11-420G6.2,WHIP,bA420G6.2 ) |
|---|---|
| Gene Full Name: | Werner helicase interacting protein 1 |
| Band: | 6p25.2 |
| Quick Links | Entrez ID:56897; OMIM: 608196; Uniprot ID:WRIP1_HUMAN; ENSEMBL ID: ENSG00000124535; HGNC ID: 20876 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.236828
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 49 / 564012 | 86 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 2 / 23620 | 84 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 97 / 1939121 | 50 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 6 / 94178 | 63 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 7 / 82823 | 84 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 9 / 119369 | 75 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 13 / 106883 | 121 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 15 / 95842 | 156 | |
| liver tumor | 6 / 96359 | 62 | |
| lung tumor | 6 / 103127 | 58 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 1 / 97250 | 10 |  |
| normal | 157 / 3360307 | 46 | |
| ovarian tumor | 8 / 76682 | 104 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 0 / 29757 | 0 | |
| blood | 7 / 123478 | 56 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 45 / 1100989 | 40 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 8 / 215722 | 37 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 9 / 211054 | 42 | |
| heart | 3 / 89626 | 33 | |
| intestine | 19 / 234472 | 81 | |
| kidney | 10 / 211777 | 47 | |
| larynx | 1 / 24145 | 41 | |
| liver | 13 / 207743 | 62 | |
| lung | 42 / 336974 | 124 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 11 / 91610 | 120 | |
| mammary gland | 6 / 153271 | 39 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 7 / 107715 | 64 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 10 / 102051 | 97 | |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 8 / 20539 | 389 |  |
| pharynx | 3 / 41328 | 72 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 8 / 280825 | 28 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 10 / 210574 | 47 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 6 / 96619 | 62 | |
| testis | 8 / 330442 | 24 | |
| thymus | 3 / 81131 | 36 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 9 / 232878 | 38 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_11518_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.89 ± 0.45 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.22 ± 0.21 | |
| Basal Part of Pons | 5.16 ± 0.4 | |
| Cerebellar Cortex | 5.5 ± 0.26 | |
| Cerebellar Nuclei | 4.9 ± 0.46 | |
| Claustrum | 4.9 ± 0.65 | |
| Epithalamus | 5.24 ± 0.51 | |
| Frontal Lobe | 4.98 ± 0.44 | |
| Globus Pallidus | 5.14 ± 0.39 | |
| Hypothalamus | 5.17 ± 0.41 | |
| Insula | 5.14 ± 0.21 | |
| Limbic Lobe | 5.04 ± 0.49 | |
| Mesencephalon | 4.99 ± 0.48 | |
| Myelencephalon | 5.04 ± 0.43 | |
| Occipital Lobe | 5.1 ± 0.42 | |
| Parietal Lobe | 5.02 ± 0.38 | |
| Pontine Tegmentum | 5.02 ± 0.44 | |
| Striatum | 4.99 ± 0.47 | |
| Subthalamus | 4.63 ± 0.74 | |
| Temporal Lobe | 5.13 ± 0.4 | |
| Thalamus | 4.97 ± 0.35 | |
| White Matter | 5.77 ± 0.24 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Wrnip1 | CB | Cerebellum | 6.6 | |
| 9.32 | | |||
| Wrnip1 | CTX | Cerebral cortex | 60.96 | |
| 51.76 | | |||
| Wrnip1 | HIP | Hippocampal region | 23.04 | |
| 43.67 | | |||
| Wrnip1 | HPF | Hippocampal formation | 25.41 | |
| 37.74 | | |||
| Wrnip1 | HY | Hypothalamus | 32.92 | |
| 27.51 | | |||
| Wrnip1 | LSX | Lateral septal complex | 33.97 | |
| 25.99 | | |||
| Wrnip1 | MB | Midbrain | 18.66 | |
| 19.57 | | |||
| Wrnip1 | MY | Medulla | 13.55 | |
| 16.68 | | |||
| Wrnip1 | OLF | Olfactory bulb | 33.34 | |
| 31.25 | | |||
| Wrnip1 | P | Pons | 18.02 | |
| 21.85 | | |||
| Wrnip1 | PAL | Pallidum | 15.32 | |
| 13.68 | | |||
| Wrnip1 | RHP | Retrohippocampal region | 30.48 | |
| 31.05 | | |||
| Wrnip1 | sAMY | Striatum-like amygdalar nuclei | 19.73 | |
| 17.53 | | |||
| Wrnip1 | STR | Striatum | 24.01 | |
| 18.49 | | |||
| Wrnip1 | STRd | Striatum dorsal region | 23.03 | |
| 17.86 | | |||
| Wrnip1 | STRv | Striatum ventral region | 23.85 | |
| 15.65 | | |||
| Wrnip1 | TH | Thalamus | 33.9 | |
| 32.66 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00009570 | 18 | 39 | 56 | CLLLHPAGHAEPAAGSHR | Peptide Atlas |