Annotation Detail for SPIRE1
Basic Information Top
| Gene Symbol: | SPIRE1 ( MGC150621,MGC150622,Spir-1 ) |
|---|---|
| Gene Full Name: | spire homolog 1 (Drosophila) |
| Band: | 18p11.21 |
| Quick Links | Entrez ID:56907; OMIM: 609216; Uniprot ID:SPIR1_HUMAN; ENSEMBL ID: ENSG00000134278; HGNC ID: 30622 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.515283
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 35 / 564012 | 62 |  |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 109 / 1939121 | 56 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 8 / 82823 | 96 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 6 / 106883 | 56 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 4 / 95842 | 41 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 31 / 103127 | 300 |  |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 164 / 3360307 | 48 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 8 / 71655 | 111 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 46 / 1100989 | 41 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 5 / 16212 | 308 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 9 / 211054 | 42 | |
| heart | 0 / 89626 | 0 | |
| intestine | 2 / 234472 | 8 | |
| kidney | 8 / 211777 | 37 | |
| larynx | 0 / 24145 | 0 | |
| liver | 7 / 207743 | 33 | |
| lung | 46 / 336974 | 136 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 6 / 153271 | 39 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 4 / 107715 | 37 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 16 / 214812 | 74 | |
| parathyroid | 3 / 20539 | 146 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 13 / 280825 | 46 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 4 / 210574 | 18 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 28 / 330442 | 84 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 5 / 52413 | 95 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 2 / 51780 | 38 | |
- Probe name: CUST_5879_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.77 ± 0.18 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.64 ± 0.11 | |
| Basal Part of Pons | 7.33 ± 0.35 | |
| Cerebellar Cortex | 7.74 ± 0.12 | |
| Cerebellar Nuclei | 7.35 ± 0.16 | |
| Claustrum | 7.82 ± 0.3 | |
| Epithalamus | 7.47 ± 0.35 | |
| Frontal Lobe | 7.55 ± 0.26 | |
| Globus Pallidus | 7.28 ± 0.14 | |
| Hypothalamus | 7.3 ± 0.27 | |
| Insula | 7.51 ± 0.25 | |
| Limbic Lobe | 7.55 ± 0.34 | |
| Mesencephalon | 7.54 ± 0.34 | |
| Myelencephalon | 7.58 ± 0.31 | |
| Occipital Lobe | 7.86 ± 0.33 | |
| Parietal Lobe | 7.63 ± 0.26 | |
| Pontine Tegmentum | 7.6 ± 0.3 | |
| Striatum | 6.85 ± 0.23 | |
| Subthalamus | 7.19 ± 0.23 | |
| Temporal Lobe | 7.58 ± 0.22 | |
| Thalamus | 7.64 ± 0.27 | |
| White Matter | 6.87 ± 0.24 | |
Mouse Brain ISH 
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00501817 | 21 | 202 | 222 | LCAAHLPTESDAPNHYQAVCR | Peptide Atlas |