AutismKB 2.0

Annotation Detail for ACN9


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:ACN9 ( - )
Gene Full Name: ACN9 homolog (S. cerevisiae)
Band: 7q21.3
Quick LinksEntrez ID:57001; OMIM: NA; Uniprot ID:ACN9_HUMAN; ENSEMBL ID: ENSG00000196636; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus1 / 5640121
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult43 / 193912122
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma5 / 17475286
breast (mammary gland) tumor1 / 9417810
cervical tumor2 / 3436658
chondrosarcoma0 / 828230 
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor2 / 2638457
glioma0 / 1068830 
head and neck tumor5 / 13630236
kidney tumor1 / 6895914
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal53 / 336030715
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma1 / 4635621
skin tumor5 / 12494940
soft tissue/muscle tissue tumor20 / 125191159
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites1 / 4001524
bladder7 / 29757235
blood1 / 1234788
bone1 / 7165513
bone marrow1 / 4880120
brain9 / 11009898
cervix2 / 4817141
connective tissue20 / 149255133
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye3 / 21105414
heart1 / 8962611
intestine4 / 23447217
kidney3 / 21177714
larynx0 / 241450 
liver3 / 20774314
lung1 / 3369742
lymph0 / 442700 
lymph node1 / 9161010
mammary gland1 / 1532716
mouth0 / 670520 
muscle2 / 10771518
nerve1 / 1576863
ovary0 / 1020510 
pancreas6 / 21481227
parathyroid1 / 2053948
pharynx6 / 41328145
pituitary gland0 / 165850 
placenta4 / 28082514
prostate2 / 18934510
salivary gland0 / 201550 
skin9 / 21057442
spleen0 / 539520 
stomach2 / 9661920
testis11 / 33044233
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 218981_at
Cell line Expression level Expression bar
721_B_lymphoblasts21.55
Adipocyte12.45
AdrenalCortex23.7
Adrenalgland13.7
Amygdala14.9
Appendix21.85
AtrioventricularNode23
BDCA4+_DentriticCells14.25
Bonemarrow16.85
BronchialEpithelialCells14.2
CD105+_Endothelial29.85
CD14+_Monocytes16.3
CD19+_BCells(neg._sel.)15.05
CD33+_Myeloid19.65
CD34+34.7
CD4+_Tcells14.55
CD56+_NKCells16.05
CD71+_EarlyErythroid14.4
CD8+_Tcells12.8
CardiacMyocytes30.75
Caudatenucleus13.35
Cerebellum11.6
CerebellumPeduncles18.7
CiliaryGanglion19.5
CingulateCortex15.95
Colorectaladenocarcinoma24.2
DorsalRootGanglion16.15
FetalThyroid15.5
Fetalbrain11.5
Fetalliver13.55
Fetallung8.35
GlobusPallidus12.65
Heart28.6
Hypothalamus13.65
Kidney14.7
Leukemia_chronicMyelogenousK-56216.2
Leukemia_promyelocytic-HL-6042.45
Leukemialymphoblastic(MOLT-4)13.65
Liver24.95
Lung14.35
Lymphnode9.95
Lymphoma_burkitts(Daudi)23.8
Lymphoma_burkitts(Raji)24.35
MedullaOblongata12.1
OccipitalLobe13.1
OlfactoryBulb10.25
Ovary12.7
Pancreas13.5
PancreaticIslet15.65
ParietalLobe17.3
Pituitary16.35
Placenta10.7
Pons16.45
PrefrontalCortex13.75
Prostate17.35
Salivarygland12.8
SkeletalMuscle30
Skin19.35
SmoothMuscle16.8
Spinalcord15.2
SubthalamicNucleus15.75
SuperiorCervicalGanglion35.15
TemporalLobe14.2
Testis12.55
TestisGermCell9.2
TestisIntersitial12.55
TestisLeydigCell16.3
TestisSeminiferousTubule12
Thalamus15.7
Thymus10.55
Thyroid18.7
Tongue20.55
Tonsil14.85
Trachea12.25
TrigeminalGanglion24.85
Uterus11.3
UterusCorpus17.3
WholeBlood16.25
Wholebrain11.4
colon21.6
pineal_day17.22
pineal_night16.86
retina18.3
small_intestine37.4
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6128_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.3 ± 0.17
Basal Forebrain7.9 ± 0.1
Basal Part of Pons8.09 ± 0.23
Cerebellar Cortex7.71 ± 0.23
Cerebellar Nuclei8.22 ± 0.29
Claustrum8.09 ± 0.39
Epithalamus8.5 ± 0.27
Frontal Lobe7.99 ± 0.32
Globus Pallidus8.45 ± 0.18
Hypothalamus8.23 ± 0.2
Insula7.85 ± 0.2
Limbic Lobe8.07 ± 0.29
Mesencephalon8.09 ± 0.3
Myelencephalon8.04 ± 0.29
Occipital Lobe8.23 ± 0.29
Parietal Lobe8.07 ± 0.29
Pontine Tegmentum8.01 ± 0.32
Striatum8.26 ± 0.36
Subthalamus7.89 ± 0.06
Temporal Lobe7.93 ± 0.26
Thalamus7.92 ± 0.23
White Matter8.51 ± 0.28
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Acn9CBCerebellum3.61
4.26
Acn9CTXCerebral cortex5.64
5.11
Acn9HIPHippocampal region3.6
3.5
Acn9HPFHippocampal formation3.38
2.93
Acn9HYHypothalamus0.95
0.77
Acn9LSXLateral septal complex0.2
0.14
Acn9MBMidbrain1.78
1.78
Acn9MYMedulla3.05
3.35
Acn9OLFOlfactory bulb5.41
5.91
Acn9PPons3.09
3.35
Acn9PALPallidum1.75
1.38
Acn9RHPRetrohippocampal region2.99
2.1
Acn9sAMYStriatum-like amygdalar nuclei2.85
1.75
Acn9STRStriatum1.29
0.84
Acn9STRdStriatum dorsal region1.28
0.89
Acn9STRvStriatum ventral region0.65
0.35
Acn9THThalamus0.85
0.68
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved