AutismKB 2.0

Annotation Detail for CXCR7


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Basic Information Top
Gene Symbol:CXCR7 ( CMKOR1,GPR159,RDC1 )
Gene Full Name: chemokine (C-X-C motif) receptor 7
Band: 2q37.3
Quick LinksEntrez ID:57007; OMIM: 610376; Uniprot ID:CXCR7_HUMAN; ENSEMBL ID: ENSG00000144476; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body8 / 70761113
blastocyst2 / 6231932
fetus17 / 56401230
neonate1 / 3109732
infant0 / 236200 
juvenile1 / 5555617
adult89 / 193912145
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor4 / 9417842
cervical tumor0 / 343660 
chondrosarcoma4 / 8282348
colorectal tumor1 / 1142468
esophageal tumor6 / 17290347
gastrointestinal tumor4 / 11936933
germ cell tumor9 / 26384534
glioma1 / 1068839
head and neck tumor3 / 13630222
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor1 / 1031279
lymphoma1 / 7175513
non-neoplasia14 / 97250143
normal147 / 336030743
ovarian tumor3 / 7668239
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder2 / 2975767
blood0 / 1234780 
bone1 / 7165513
bone marrow1 / 4880120
brain29 / 110098926
cervix0 / 481710 
connective tissue21 / 149255140
ear0 / 162120 
embryonic tissue16 / 21572274
esophagus6 / 20209296
eye13 / 21105461
heart7 / 8962678
intestine8 / 23447234
kidney3 / 21177714
larynx2 / 2414582
liver1 / 2077434
lung14 / 33697441
lymph1 / 4427022
lymph node0 / 916100 
mammary gland4 / 15327126
mouth0 / 670520 
muscle1 / 1077159
nerve1 / 1576863
ovary4 / 10205139
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta30 / 280825106
prostate1 / 1893455
salivary gland0 / 201550 
skin2 / 2105749
spleen1 / 5395218
stomach8 / 9661982
testis23 / 33044269
thymus2 / 8113124
thyroid1 / 4747321
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord1 / 1368073
uterus3 / 23287812
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212977_at
Cell line Expression level Expression bar
721_B_lymphoblasts52.25
Adipocyte12.05
AdrenalCortex6.2
Adrenalgland4.9
Amygdala8.05
Appendix8.8
AtrioventricularNode4.85
BDCA4+_DentriticCells5.55
Bonemarrow5.75
BronchialEpithelialCells89.65
CD105+_Endothelial5.6
CD14+_Monocytes5.9
CD19+_BCells(neg._sel.)5.85
CD33+_Myeloid7.25
CD34+7.4
CD4+_Tcells6.95
CD56+_NKCells6.95
CD71+_EarlyErythroid5.45
CD8+_Tcells5.65
CardiacMyocytes7.55
Caudatenucleus5.15
Cerebellum4.6
CerebellumPeduncles6.55
CiliaryGanglion6.55
CingulateCortex5.9
Colorectaladenocarcinoma5.6
DorsalRootGanglion5
FetalThyroid6
Fetalbrain5.65
Fetalliver4.95
Fetallung40.7
GlobusPallidus4.25
Heart35.7
Hypothalamus6.25
Kidney4.8
Leukemia_chronicMyelogenousK-5625.1
Leukemia_promyelocytic-HL-6012.25
Leukemialymphoblastic(MOLT-4)4.25
Liver7.8
Lung25.65
Lymphnode11.75
Lymphoma_burkitts(Daudi)7.35
Lymphoma_burkitts(Raji)182.85
MedullaOblongata5.15
OccipitalLobe5.05
OlfactoryBulb4.7
Ovary4.6
Pancreas5.65
PancreaticIslet6.05
ParietalLobe6.15
Pituitary6.7
Placenta126
Pons5.5
PrefrontalCortex7.05
Prostate6.85
Salivarygland4.65
SkeletalMuscle7.05
Skin4.55
SmoothMuscle6.25
Spinalcord7.55
SubthalamicNucleus5.3
SuperiorCervicalGanglion32.5
TemporalLobe5.25
Testis18.2
TestisGermCell5.6
TestisIntersitial4.85
TestisLeydigCell6.2
TestisSeminiferousTubule4.9
Thalamus5.95
Thymus22.15
Thyroid276.35
Tongue5.8
Tonsil5.6
Trachea69.5
TrigeminalGanglion6
Uterus14.5
UterusCorpus6.5
WholeBlood5.95
Wholebrain10.05
colon35.15
pineal_day7.04
pineal_night7
retina106.1
small_intestine102.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_9077_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.16 ± 1.01
Basal Forebrain1.65 ± 0.27
Basal Part of Pons1.52 ± 0.45
Cerebellar Cortex1.64 ± 0.61
Cerebellar Nuclei2.05 ± 0.71
Claustrum2.62 ± 0.86
Epithalamus1.51 ± 0.65
Frontal Lobe1.66 ± 0.57
Globus Pallidus2.49 ± 0.54
Hypothalamus1.73 ± 0.58
Insula1.65 ± 0.38
Limbic Lobe1.89 ± 0.64
Mesencephalon1.92 ± 0.63
Myelencephalon1.86 ± 0.7
Occipital Lobe1.79 ± 0.53
Parietal Lobe1.84 ± 0.68
Pontine Tegmentum1.9 ± 0.69
Striatum2.2 ± 1.02
Subthalamus2.15 ± 0.83
Temporal Lobe1.73 ± 0.61
Thalamus1.88 ± 0.75
White Matter2.28 ± 0.41
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00038890 14 349 362 VSETEYSALEQSTK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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