AutismKB 2.0

Annotation Detail for CAMK1G


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Basic Information Top
Gene Symbol:CAMK1G ( CLICKIII,VWS1,dJ272L16.1 )
Gene Full Name: calcium/calmodulin-dependent protein kinase IG
Band: 1q32.2
Quick LinksEntrez ID:57172; OMIM: NA; Uniprot ID:KCC1G_HUMAN; ENSEMBL ID: ENSG00000008118; HGNC ID: 14585
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus20 / 56401235
neonate0 / 310970 
infant2 / 2362084
juvenile0 / 555560 
adult27 / 193912113
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor7 / 26384526
glioma0 / 1068830 
head and neck tumor3 / 13630222
kidney tumor3 / 6895943
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia2 / 9725020
normal143 / 336030742
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain121 / 1100989109
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye0 / 2110540 
heart1 / 8962611
intestine2 / 2344728
kidney10 / 21177747
larynx0 / 241450 
liver0 / 2077430 
lung0 / 3369740 
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary2 / 10205119
pancreas5 / 21481223
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta1 / 2808253
prostate0 / 1893450 
salivary gland3 / 20155148
skin0 / 2105740 
spleen1 / 5395218
stomach0 / 966190 
testis3 / 3304429
thymus1 / 8113112
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 217128_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts12.05
Adipocyte9.85
AdrenalCortex11.15
Adrenalgland8.75
Amygdala27.05
Appendix22.25
AtrioventricularNode10.6
BDCA4+_DentriticCells10.65
Bonemarrow12.8
BronchialEpithelialCells9.85
CD105+_Endothelial10.2
CD14+_Monocytes10.25
CD19+_BCells(neg._sel.)10
CD33+_Myeloid12.85
CD34+12.25
CD4+_Tcells10.35
CD56+_NKCells13.3
CD71+_EarlyErythroid9.95
CD8+_Tcells9.65
CardiacMyocytes19.3
Caudatenucleus11.9
Cerebellum9.15
CerebellumPeduncles11.65
CiliaryGanglion8.45
CingulateCortex14
Colorectaladenocarcinoma10.25
DorsalRootGanglion9.55
FetalThyroid10.25
Fetalbrain10.75
Fetalliver17
Fetallung8.65
GlobusPallidus12.1
Heart13.55
Hypothalamus11.25
Kidney9.45
Leukemia_chronicMyelogenousK-5629.3
Leukemia_promyelocytic-HL-608.7
Leukemialymphoblastic(MOLT-4)8.1
Liver16.35
Lung11.3
Lymphnode10
Lymphoma_burkitts(Daudi)12.8
Lymphoma_burkitts(Raji)13.9
MedullaOblongata11.45
OccipitalLobe12.55
OlfactoryBulb8.85
Ovary8.4
Pancreas8.45
PancreaticIslet13.35
ParietalLobe17.25
Pituitary14.1
Placenta10.6
Pons12.5
PrefrontalCortex23.7
Prostate11.7
Salivarygland10.3
SkeletalMuscle12.15
Skin11.15
SmoothMuscle11.4
Spinalcord13.3
SubthalamicNucleus12.25
SuperiorCervicalGanglion21.55
TemporalLobe15.95
Testis8.85
TestisGermCell8.65
TestisIntersitial8.45
TestisLeydigCell10.5
TestisSeminiferousTubule12.75
Thalamus10.15
Thymus8
Thyroid12.65
Tongue12.2
Tonsil10
Trachea8.8
TrigeminalGanglion16.7
Uterus8.65
UterusCorpus9.2
WholeBlood9.7
Wholebrain34.05
colon8.25
pineal_day12.76
pineal_night12.14
retina15.25
small_intestine8
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P364428
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.17 ± 0.48
Basal Forebrain4.03 ± 0.35
Basal Part of Pons3.59 ± 0.84
Cerebellar Cortex3.22 ± 0.56
Cerebellar Nuclei3.42 ± 0.55
Claustrum3.74 ± 0.65
Epithalamus2.91 ± 0.53
Frontal Lobe4.16 ± 0.55
Globus Pallidus2.62 ± 1.14
Hypothalamus3.91 ± 0.66
Insula4.19 ± 0.39
Limbic Lobe4.01 ± 0.77
Mesencephalon3.7 ± 0.74
Myelencephalon3.89 ± 0.69
Occipital Lobe2.98 ± 0.95
Parietal Lobe3.94 ± 0.54
Pontine Tegmentum3.73 ± 0.67
Striatum3.72 ± 0.84
Subthalamus3.42 ± 0.25
Temporal Lobe4.03 ± 0.58
Thalamus3.31 ± 0.63
White Matter2.49 ± 1.06
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Camk1gCBCerebellum5.69
6.52
Camk1gCTXCerebral cortex29.74
24.93
Camk1gHIPHippocampal region14.46
16.29
Camk1gHPFHippocampal formation19.63
19.89
Camk1gHYHypothalamus6.6
5.97
Camk1gLSXLateral septal complex11.9
9.41
Camk1gMBMidbrain5.44
5.43
Camk1gMYMedulla10.18
12.32
Camk1gOLFOlfactory bulb11.33
9.6
Camk1gPPons8.5
9.58
Camk1gPALPallidum6.1
5.37
Camk1gRHPRetrohippocampal region26.36
23.18
Camk1gsAMYStriatum-like amygdalar nuclei14.29
12.45
Camk1gSTRStriatum8.51
6.37
Camk1gSTRdStriatum dorsal region5.54
3.98
Camk1gSTRvStriatum ventral region12.32
8.34
Camk1gTHThalamus1.5
1.56
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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