Annotation Detail for ANKRD50
Basic Information Top
| Gene Symbol: | ANKRD50 ( KIAA1223 ) |
|---|---|
| Gene Full Name: | ankyrin repeat domain 50 |
| Band: | 4q28.1 |
| Quick Links | Entrez ID:57182; OMIM: NA; Uniprot ID:ANR50_HUMAN; ENSEMBL ID: ENSG00000151458; HGNC ID: 29223 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.480694
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 30 / 564012 | 53 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 4 / 55556 | 71 | |
| adult | 61 / 1939121 | 31 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 104 / 3360307 | 30 | |
| ovarian tumor | 4 / 76682 | 52 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 8 / 125191 | 63 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 2 / 29757 | 67 | |
| blood | 1 / 123478 | 8 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 24 / 1100989 | 21 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 8 / 149255 | 53 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 5 / 211054 | 23 | |
| heart | 2 / 89626 | 22 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 10 / 336974 | 29 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 9 / 153271 | 58 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 4 / 15768 | 253 |  |
| ovary | 4 / 102051 | 39 | |
| pancreas | 3 / 214812 | 13 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 9 / 280825 | 32 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 4 / 210574 | 18 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 23 / 330442 | 69 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 4 / 51780 | 77 | |
Microarray in - Probe name: CUST_223_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.83 ± 0.25 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.96 ± 0.16 | |
| Basal Part of Pons | 8.05 ± 0.2 | |
| Cerebellar Cortex | 8.21 ± 0.29 | |
| Cerebellar Nuclei | 8.78 ± 0.42 | |
| Claustrum | 8.87 ± 0.26 | |
| Epithalamus | 8.33 ± 0.47 | |
| Frontal Lobe | 8.59 ± 0.35 | |
| Globus Pallidus | 8.4 ± 0.4 | |
| Hypothalamus | 8.81 ± 0.44 | |
| Insula | 8.83 ± 0.28 | |
| Limbic Lobe | 8.78 ± 0.4 | |
| Mesencephalon | 8.69 ± 0.52 | |
| Myelencephalon | 8.54 ± 0.39 | |
| Occipital Lobe | 8.19 ± 0.32 | |
| Parietal Lobe | 8.44 ± 0.37 | |
| Pontine Tegmentum | 8.67 ± 0.34 | |
| Striatum | 8.43 ± 0.39 | |
| Subthalamus | 8.52 ± 0.07 | |
| Temporal Lobe | 8.62 ± 0.32 | |
| Thalamus | 8.21 ± 0.28 | |
| White Matter | 7.91 ± 0.33 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ankrd50 | CB | Cerebellum | 11.48 | |
| 12.95 | | |||
| Ankrd50 | CTX | Cerebral cortex | 22.56 | |
| 16.66 | | |||
| Ankrd50 | HIP | Hippocampal region | 13.67 | |
| 15.41 | | |||
| Ankrd50 | HPF | Hippocampal formation | 17.13 | |
| 16.81 | | |||
| Ankrd50 | HY | Hypothalamus | 9.93 | |
| 8.16 | | |||
| Ankrd50 | LSX | Lateral septal complex | 17.31 | |
| 13.06 | | |||
| Ankrd50 | MB | Midbrain | 8.81 | |
| 9.37 | | |||
| Ankrd50 | MY | Medulla | 20.2 | |
| 26 | | |||
| Ankrd50 | OLF | Olfactory bulb | 35.4 | |
| 29.63 | | |||
| Ankrd50 | P | Pons | 11.92 | |
| 14.62 | | |||
| Ankrd50 | PAL | Pallidum | 11.3 | |
| 11.41 | | |||
| Ankrd50 | RHP | Retrohippocampal region | 22.73 | |
| 18.79 | | |||
| Ankrd50 | sAMY | Striatum-like amygdalar nuclei | 10.88 | |
| 8.82 | | |||
| Ankrd50 | STR | Striatum | 9.21 | |
| 7.13 | | |||
| Ankrd50 | STRd | Striatum dorsal region | 7.54 | |
| 6.12 | | |||
| Ankrd50 | STRv | Striatum ventral region | 11.03 | |
| 7.43 | | |||
| Ankrd50 | TH | Thalamus | 9.26 | |
| 7.58 | |