AutismKB 2.0

Annotation Detail for THAP11


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Basic Information Top
Gene Symbol:THAP11 ( CTG-B43a,CTG-B45d,RONIN )
Gene Full Name: THAP domain containing 11
Band: 16q22.1
Quick LinksEntrez ID:57215; OMIM: 609119; Uniprot ID:THA11_HUMAN; ENSEMBL ID: ENSG00000168286; HGNC ID: 23194
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus40 / 56401270
neonate0 / 310970 
infant0 / 236200 
juvenile3 / 5555653
adult54 / 193912127
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor2 / 3436658
chondrosarcoma1 / 8282312
colorectal tumor3 / 11424626
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor7 / 26384526
glioma11 / 106883102
head and neck tumor2 / 13630214
kidney tumor3 / 6895943
leukemia13 / 95842135
liver tumor2 / 9635920
lung tumor7 / 10312767
lymphoma7 / 7175597
non-neoplasia5 / 9725051
normal115 / 336030734
ovarian tumor12 / 76682156
pancreatic tumor4 / 10461638
primitive neuroectodermal tumor of the CNS7 / 12568055
prostate cancer9 / 10268087
retinoblastoma2 / 4635643
skin tumor13 / 124949104
soft tissue/muscle tissue tumor5 / 12519139
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites2 / 4001549
bladder1 / 2975733
blood5 / 12347840
bone3 / 7165541
bone marrow0 / 488010 
brain33 / 110098929
cervix2 / 4817141
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye10 / 21105447
heart8 / 8962689
intestine13 / 23447255
kidney7 / 21177733
larynx1 / 2414541
liver3 / 20774314
lung34 / 336974100
lymph4 / 4427090
lymph node6 / 9161065
mammary gland7 / 15327145
mouth0 / 670520 
muscle3 / 10771527
nerve0 / 157680 
ovary16 / 102051156
pancreas16 / 21481274
parathyroid2 / 2053997
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta3 / 28082510
prostate11 / 18934558
salivary gland0 / 201550 
skin16 / 21057475
spleen1 / 5395218
stomach1 / 9661910
testis2 / 3304426
thymus1 / 8113112
thyroid0 / 474730 
tonsil1 / 1699958
trachea0 / 524130 
umbilical cord0 / 136800 
uterus9 / 23287838
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212910_at
Cell line Expression level Expression bar
721_B_lymphoblasts86.75
Adipocyte22.05
AdrenalCortex20.6
Adrenalgland21.05
Amygdala27.1
Appendix19.35
AtrioventricularNode13.4
BDCA4+_DentriticCells58.15
Bonemarrow20.5
BronchialEpithelialCells14.55
CD105+_Endothelial68.4
CD14+_Monocytes75.55
CD19+_BCells(neg._sel.)111.1
CD33+_Myeloid59.9
CD34+87.3
CD4+_Tcells62.1
CD56+_NKCells106.8
CD71+_EarlyErythroid26.75
CD8+_Tcells46.6
CardiacMyocytes26.1
Caudatenucleus19.55
Cerebellum24.7
CerebellumPeduncles27.1
CiliaryGanglion14.8
CingulateCortex25.2
Colorectaladenocarcinoma26
DorsalRootGanglion18.95
FetalThyroid22.55
Fetalbrain24
Fetalliver15
Fetallung14.9
GlobusPallidus18.55
Heart85.5
Hypothalamus24.45
Kidney21
Leukemia_chronicMyelogenousK-56222.7
Leukemia_promyelocytic-HL-6040.05
Leukemialymphoblastic(MOLT-4)18.3
Liver28.2
Lung88.1
Lymphnode30.15
Lymphoma_burkitts(Daudi)57.15
Lymphoma_burkitts(Raji)86.5
MedullaOblongata17.85
OccipitalLobe24.4
OlfactoryBulb14.75
Ovary12.05
Pancreas12.95
PancreaticIslet24.9
ParietalLobe17.75
Pituitary27.1
Placenta26.55
Pons23
PrefrontalCortex29.35
Prostate56.4
Salivarygland19.95
SkeletalMuscle34.65
Skin17.85
SmoothMuscle16.65
Spinalcord20.7
SubthalamicNucleus19.3
SuperiorCervicalGanglion20.35
TemporalLobe21.35
Testis20.5
TestisGermCell18.3
TestisIntersitial13.45
TestisLeydigCell22.3
TestisSeminiferousTubule16
Thalamus23
Thymus82.3
Thyroid43.85
Tongue25.05
Tonsil22.5
Trachea21.15
TrigeminalGanglion21.4
Uterus26.9
UterusCorpus17.25
WholeBlood98.75
Wholebrain64.9
colon30.75
pineal_day41.7
pineal_night40.9
retina60.825
small_intestine42.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_13942_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.4 ± 0.92
Basal Forebrain1.89 ± 0.16
Basal Part of Pons1.75 ± 0.46
Cerebellar Cortex1.97 ± 0.76
Cerebellar Nuclei2.22 ± 0.8
Claustrum2.83 ± 0.77
Epithalamus1.95 ± 0.65
Frontal Lobe2.14 ± 0.78
Globus Pallidus2.52 ± 0.68
Hypothalamus2.05 ± 0.51
Insula2.05 ± 0.69
Limbic Lobe2.04 ± 0.66
Mesencephalon2.17 ± 0.67
Myelencephalon2.07 ± 0.72
Occipital Lobe2.06 ± 0.78
Parietal Lobe1.96 ± 0.69
Pontine Tegmentum2.16 ± 0.79
Striatum2.18 ± 0.8
Subthalamus2.18 ± 0.94
Temporal Lobe1.97 ± 0.67
Thalamus1.99 ± 0.72
White Matter1.99 ± 0.37
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Thap11CBCerebellum25.83
34.28
Thap11CTXCerebral cortex37.31
25.58
Thap11HIPHippocampal region35.08
48.29
Thap11HPFHippocampal formation33.39
37.79
Thap11HYHypothalamus2.7
1.83
Thap11LSXLateral septal complex9.08
6.06
Thap11MBMidbrain6.04
4.74
Thap11MYMedulla7.27
6.26
Thap11OLFOlfactory bulb32.13
25.46
Thap11PPons4.83
4.37
Thap11PALPallidum5.42
4.21
Thap11RHPRetrohippocampal region31.02
24.6
Thap11sAMYStriatum-like amygdalar nuclei8.05
5.21
Thap11STRStriatum14.4
9.39
Thap11STRdStriatum dorsal region16.08
10.57
Thap11STRvStriatum ventral region12.6
7.92
Thap11THThalamus6.12
4.73
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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