Annotation Detail for PTGFRN
Basic Information Top
| Gene Symbol: | PTGFRN ( CD315,CD9P-1,EWI-F,FLJ11001,FPRP,KIAA1436,SMAP-6 ) |
|---|---|
| Gene Full Name: | prostaglandin F2 receptor negative regulator |
| Band: | 1p13.1 |
| Quick Links | Entrez ID:5738; OMIM: 601204; Uniprot ID:FPRP_HUMAN; ENSEMBL ID: ENSG00000134247; HGNC ID: 9601 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.418093
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 12 / 70761 | 169 |  |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 25 / 564012 | 44 | |
| neonate | 2 / 31097 | 64 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 419 / 1939121 | 216 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 5 / 17475 | 286 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 7 / 82823 | 84 | |
| colorectal tumor | 7 / 114246 | 61 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 293 / 119369 | 2454 |  |
| germ cell tumor | 18 / 263845 | 68 | |
| glioma | 6 / 106883 | 56 | |
| head and neck tumor | 11 / 136302 | 80 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 154 / 3360307 | 45 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 1 / 29757 | 33 | |
| blood | 0 / 123478 | 0 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 22 / 1100989 | 19 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 8 / 149255 | 53 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 17 / 215722 | 78 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 8 / 211054 | 37 | |
| heart | 15 / 89626 | 167 | |
| intestine | 21 / 234472 | 89 | |
| kidney | 8 / 211777 | 37 | |
| larynx | 0 / 24145 | 0 | |
| liver | 4 / 207743 | 19 | |
| lung | 10 / 336974 | 29 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 12 / 153271 | 78 | |
| mouth | 9 / 67052 | 134 | |
| muscle | 7 / 107715 | 64 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 6 / 102051 | 58 | |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 18 / 280825 | 64 | |
| prostate | 14 / 189345 | 73 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 19 / 210574 | 90 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 291 / 96619 | 3011 | |
| testis | 11 / 330442 | 33 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 16 / 232878 | 68 | |
| vascular | 3 / 51780 | 57 | |
Microarray in - Probe name: A_23_P114968
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.7 ± 0.8 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.56 ± 0.27 | |
| Basal Part of Pons | 3.37 ± 0.36 | |
| Cerebellar Cortex | 3.2 ± 0.67 | |
| Cerebellar Nuclei | 3.91 ± 0.65 | |
| Claustrum | 3.79 ± 0.67 | |
| Epithalamus | 3.18 ± 0.75 | |
| Frontal Lobe | 3.71 ± 0.63 | |
| Globus Pallidus | 3.63 ± 0.69 | |
| Hypothalamus | 3.19 ± 0.44 | |
| Insula | 3.49 ± 0.54 | |
| Limbic Lobe | 3.67 ± 0.68 | |
| Mesencephalon | 3.81 ± 0.69 | |
| Myelencephalon | 3.7 ± 0.71 | |
| Occipital Lobe | 3.42 ± 0.83 | |
| Parietal Lobe | 3.65 ± 0.72 | |
| Pontine Tegmentum | 3.48 ± 0.58 | |
| Striatum | 3.65 ± 0.73 | |
| Subthalamus | 4.43 ± 0.68 | |
| Temporal Lobe | 3.69 ± 0.59 | |
| Thalamus | 3.55 ± 0.57 | |
| White Matter | 3.38 ± 0.72 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ptgfrn | CB | Cerebellum | 100 | |
| 100 | | |||
| Ptgfrn | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Ptgfrn | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Ptgfrn | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Ptgfrn | HY | Hypothalamus | 100 | |
| 100 | | |||
| Ptgfrn | LSX | Lateral septal complex | 100 | |
| 100 | | |||
| Ptgfrn | MB | Midbrain | 100 | |
| 100 | | |||
| Ptgfrn | MY | Medulla | 100 | |
| 100 | | |||
| Ptgfrn | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Ptgfrn | P | Pons | 100 | |
| 100 | | |||
| Ptgfrn | PAL | Pallidum | 100 | |
| 100 | | |||
| Ptgfrn | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Ptgfrn | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Ptgfrn | STR | Striatum | 100 | |
| 100 | | |||
| Ptgfrn | STRd | Striatum dorsal region | 100 | |
| 100 | | |||
| Ptgfrn | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| Ptgfrn | TH | Thalamus | 100 | |
| 100 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00039520 | 19 | 554 | 572 | ARQPKPFFAAGNTFEMTCK | Peptide Atlas |