Annotation Detail for BIRC6
Basic Information Top
| Gene Symbol: | BIRC6 ( APOLLON,BRUCE,FLJ13726,FLJ13786,KIAA1289 ) |
|---|---|
| Gene Full Name: | baculoviral IAP repeat-containing 6 |
| Band: | 2p22.3 |
| Quick Links | Entrez ID:57448; OMIM: 605638; Uniprot ID:BIRC6_HUMAN; ENSEMBL ID: ENSG00000115760; HGNC ID: 13516 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.150107
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 5 / 70761 | 70 |  |
| blastocyst | 8 / 62319 | 128 | |
| fetus | 60 / 564012 | 106 | |
| neonate | 1 / 31097 | 32 |  |
| infant | 1 / 23620 | 42 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 224 / 1939121 | 115 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 15 / 94178 | 159 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 12 / 114246 | 105 | |
| esophageal tumor | 2 / 17290 | 115 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 13 / 263845 | 49 | |
| glioma | 5 / 106883 | 46 | |
| head and neck tumor | 24 / 136302 | 176 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 4 / 95842 | 41 | |
| liver tumor | 7 / 96359 | 72 | |
| lung tumor | 7 / 103127 | 67 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 268 / 3360307 | 79 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 7 / 124949 | 56 | |
| soft tissue/muscle tissue tumor | 46 / 125191 | 367 |  |
| uterine tumor | 9 / 90257 | 99 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 3 / 13106 | 228 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 1 / 29757 | 33 | |
| blood | 4 / 123478 | 32 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 64 / 1100989 | 58 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 47 / 149255 | 314 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 17 / 215722 | 78 | |
| esophagus | 2 / 20209 | 98 | |
| eye | 11 / 211054 | 52 | |
| heart | 6 / 89626 | 66 | |
| intestine | 14 / 234472 | 59 | |
| kidney | 7 / 211777 | 33 | |
| larynx | 4 / 24145 | 165 | |
| liver | 14 / 207743 | 67 | |
| lung | 16 / 336974 | 47 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 11 / 91610 | 120 | |
| mammary gland | 33 / 153271 | 215 | |
| mouth | 10 / 67052 | 149 | |
| muscle | 8 / 107715 | 74 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 19 / 214812 | 88 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 7 / 41328 | 169 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 23 / 280825 | 81 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 22 / 210574 | 104 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 4 / 96619 | 41 | |
| testis | 27 / 330442 | 81 | |
| thymus | 9 / 81131 | 110 | |
| thyroid | 10 / 47473 | 210 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 5 / 52413 | 95 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 25 / 232878 | 107 | |
| vascular | 4 / 51780 | 77 | |
Microarray in - Probe name: A_32_P109315
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.99 ± 0.68 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.8 ± 0.81 | |
| Basal Part of Pons | 2.49 ± 0.6 | |
| Cerebellar Cortex | 2.84 ± 0.82 | |
| Cerebellar Nuclei | 3.02 ± 0.62 | |
| Claustrum | 3.39 ± 1.08 | |
| Epithalamus | 2.35 ± 0.74 | |
| Frontal Lobe | 2.82 ± 0.68 | |
| Globus Pallidus | 3.05 ± 0.55 | |
| Hypothalamus | 2.52 ± 0.68 | |
| Insula | 2.07 ± 0.78 | |
| Limbic Lobe | 2.78 ± 0.68 | |
| Mesencephalon | 2.83 ± 0.74 | |
| Myelencephalon | 2.85 ± 0.73 | |
| Occipital Lobe | 2.98 ± 0.87 | |
| Parietal Lobe | 2.81 ± 0.68 | |
| Pontine Tegmentum | 2.89 ± 0.72 | |
| Striatum | 2.97 ± 0.76 | |
| Subthalamus | 2.98 ± 0.64 | |
| Temporal Lobe | 2.7 ± 0.73 | |
| Thalamus | 2.94 ± 0.61 | |
| White Matter | 3.25 ± 0.65 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Birc6 | CB | Cerebellum | 33.51 | |
| 44.89 | | |||
| Birc6 | CTX | Cerebral cortex | 100 | |
| 95.77 | | |||
| Birc6 | HIP | Hippocampal region | 48.61 | |
| 91.41 | | |||
| Birc6 | HPF | Hippocampal formation | 63.71 | |
| 85 | | |||
| Birc6 | HY | Hypothalamus | 68.5 | |
| 55.49 | | |||
| Birc6 | LSX | Lateral septal complex | 59.81 | |
| 48.7 | | |||
| Birc6 | MB | Midbrain | 63.5 | |
| 59.86 | | |||
| Birc6 | MY | Medulla | 57.94 | |
| 68.67 | | |||
| Birc6 | OLF | Olfactory bulb | 75.13 | |
| 67.93 | | |||
| Birc6 | P | Pons | 59.99 | |
| 65.48 | | |||
| Birc6 | PAL | Pallidum | 57.96 | |
| 53.3 | | |||
| Birc6 | RHP | Retrohippocampal region | 92.37 | |
| 81.97 | | |||
| Birc6 | sAMY | Striatum-like amygdalar nuclei | 63 | |
| 50.14 | | |||
| Birc6 | STR | Striatum | 52.55 | |
| 40.15 | | |||
| Birc6 | STRd | Striatum dorsal region | 50.01 | |
| 38.75 | | |||
| Birc6 | STRv | Striatum ventral region | 54.55 | |
| 37.44 | | |||
| Birc6 | TH | Thalamus | 71.99 | |
| 65.48 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00068090 | 28 | 360 | 387 | GEHTQNVPLSVTLATSPAQFPCTDGTDR | Peptide Atlas |