Annotation Detail for TBC1D24
Basic Information Top
| Gene Symbol: | TBC1D24 ( KIAA1171,MGC102885 ) |
|---|---|
| Gene Full Name: | TBC1 domain family, member 24 |
| Band: | 16p13.3 |
| Quick Links | Entrez ID:57465; OMIM: 613577; Uniprot ID:TBC24_HUMAN; ENSEMBL ID: ENSG00000162065; HGNC ID: 29203 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.353087
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 15 / 564012 | 26 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 5 / 55556 | 89 |  |
| adult | 29 / 1939121 | 14 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 7 / 106883 | 65 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 6 / 96359 | 62 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 56 / 3360307 | 16 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 1 / 124949 | 8 |  |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 3 / 123478 | 24 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 20 / 1100989 | 18 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 7 / 215722 | 32 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 14 / 211054 | 66 | |
| heart | 3 / 89626 | 33 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 0 / 24145 | 0 | |
| liver | 8 / 207743 | 38 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 3 / 280825 | 10 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 3 / 20155 | 148 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 2 / 232878 | 8 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: CUST_10949_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.79 ± 0.51 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.24 ± 0.26 | |
| Basal Part of Pons | 4.38 ± 0.61 | |
| Cerebellar Cortex | 4.44 ± 0.55 | |
| Cerebellar Nuclei | 4.2 ± 0.28 | |
| Claustrum | 5.29 ± 0.67 | |
| Epithalamus | 3.85 ± 0.35 | |
| Frontal Lobe | 4.24 ± 0.59 | |
| Globus Pallidus | 3.95 ± 0.6 | |
| Hypothalamus | 4.06 ± 0.53 | |
| Insula | 4.41 ± 0.58 | |
| Limbic Lobe | 4.85 ± 0.6 | |
| Mesencephalon | 4.41 ± 0.72 | |
| Myelencephalon | 4.41 ± 0.65 | |
| Occipital Lobe | 4.53 ± 0.62 | |
| Parietal Lobe | 4.58 ± 0.64 | |
| Pontine Tegmentum | 4.31 ± 0.59 | |
| Striatum | 3.88 ± 0.61 | |
| Subthalamus | 4.24 ± 0.19 | |
| Temporal Lobe | 4.56 ± 0.51 | |
| Thalamus | 4.08 ± 0.55 | |
| White Matter | 3.34 ± 0.93 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Tbc1d24 | CB | Cerebellum | 14.68 | |
| 15.18 | | |||
| Tbc1d24 | CTX | Cerebral cortex | 100 | |
| 84.91 | | |||
| Tbc1d24 | HIP | Hippocampal region | 47.04 | |
| 56.2 | | |||
| Tbc1d24 | HPF | Hippocampal formation | 59.62 | |
| 63.28 | | |||
| Tbc1d24 | HY | Hypothalamus | 23.74 | |
| 17.74 | | |||
| Tbc1d24 | LSX | Lateral septal complex | 26.33 | |
| 19.16 | | |||
| Tbc1d24 | MB | Midbrain | 31.36 | |
| 26.98 | | |||
| Tbc1d24 | MY | Medulla | 35.94 | |
| 34.92 | | |||
| Tbc1d24 | OLF | Olfactory bulb | 58.95 | |
| 49.65 | | |||
| Tbc1d24 | P | Pons | 37.54 | |
| 35.15 | | |||
| Tbc1d24 | PAL | Pallidum | 30.75 | |
| 28.43 | | |||
| Tbc1d24 | RHP | Retrohippocampal region | 84.08 | |
| 76.53 | | |||
| Tbc1d24 | sAMY | Striatum-like amygdalar nuclei | 37.68 | |
| 30.58 | | |||
| Tbc1d24 | STR | Striatum | 16.69 | |
| 13.5 | | |||
| Tbc1d24 | STRd | Striatum dorsal region | 12.04 | |
| 10.22 | | |||
| Tbc1d24 | STRv | Striatum ventral region | 15.75 | |
| 11.41 | | |||
| Tbc1d24 | TH | Thalamus | 21.93 | |
| 19.19 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00025097 | 21 | 355 | 375 | FALCQPLLLFSSLQHGYSLAR | Peptide Atlas |