AutismKB 2.0

Annotation Detail for USP31


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Basic Information Top
Gene Symbol:USP31 ( KIAA1203 )
Gene Full Name: ubiquitin specific peptidase 31
Band: 16p12.2
Quick LinksEntrez ID:57478; OMIM: NA; Uniprot ID:UBP31_HUMAN; ENSEMBL ID: ENSG00000103404; HGNC ID: 20060
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst1 / 6231916
fetus29 / 56401251
neonate2 / 3109764
infant0 / 236200 
juvenile1 / 5555617
adult54 / 193912127
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor0 / 941780 
cervical tumor3 / 3436687
chondrosarcoma1 / 8282312
colorectal tumor2 / 11424617
esophageal tumor1 / 1729057
gastrointestinal tumor5 / 11936941
germ cell tumor2 / 2638457
glioma1 / 1068839
head and neck tumor12 / 13630288
kidney tumor4 / 6895958
leukemia0 / 958420 
liver tumor1 / 9635910
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal117 / 336030734
ovarian tumor0 / 766820 
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer1 / 1026809
retinoblastoma1 / 4635621
skin tumor2 / 12494916
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor4 / 9025744
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder2 / 2975767
blood0 / 1234780 
bone2 / 7165527
bone marrow0 / 488010 
brain37 / 110098933
cervix3 / 4817162
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue3 / 21572213
esophagus1 / 2020949
eye3 / 21105414
heart3 / 8962633
intestine5 / 23447221
kidney10 / 21177747
larynx7 / 24145289
liver2 / 2077439
lung13 / 33697438
lymph0 / 442700 
lymph node4 / 9161043
mammary gland3 / 15327119
mouth4 / 6705259
muscle2 / 10771518
nerve0 / 157680 
ovary0 / 1020510 
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta3 / 28082510
prostate3 / 18934515
salivary gland0 / 201550 
skin9 / 21057442
spleen0 / 539520 
stomach1 / 9661910
testis18 / 33044254
thymus2 / 8113124
thyroid0 / 474730 
tonsil0 / 169990 
trachea3 / 5241357
umbilical cord2 / 13680146
uterus13 / 23287855
vascular3 / 5178057
Microarray in BioGPS Top
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P147263
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.75 ± 0.51
Basal Forebrain8.01 ± 0.24
Basal Part of Pons8.42 ± 0.28
Cerebellar Cortex8.29 ± 0.14
Cerebellar Nuclei8.64 ± 0.21
Claustrum8.14 ± 0.36
Epithalamus7.96 ± 0.42
Frontal Lobe8.32 ± 0.25
Globus Pallidus8.32 ± 0.17
Hypothalamus8 ± 0.25
Insula8.29 ± 0.26
Limbic Lobe8.06 ± 0.37
Mesencephalon8.07 ± 0.47
Myelencephalon8.15 ± 0.41
Occipital Lobe7.85 ± 0.47
Parietal Lobe8.22 ± 0.25
Pontine Tegmentum8.26 ± 0.27
Striatum7.41 ± 0.39
Subthalamus8.73 ± 0.36
Temporal Lobe8.29 ± 0.21
Thalamus8.27 ± 0.35
White Matter9.54 ± 0.15
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Usp31CBCerebellum0
0
Usp31CTXCerebral cortex0
0
Usp31HIPHippocampal region0
0
Usp31HPFHippocampal formation0
0
Usp31HYHypothalamus0
0
Usp31LSXLateral septal complex0
0
Usp31MBMidbrain0
0
Usp31MYMedulla0
0
Usp31OLFOlfactory bulb0
0
Usp31PPons0
0
Usp31PALPallidum0
0
Usp31RHPRetrohippocampal region0
0
Usp31sAMYStriatum-like amygdalar nuclei0
0
Usp31STRStriatum0
0
Usp31STRdStriatum dorsal region0
0
Usp31STRvStriatum ventral region0
0
Usp31THThalamus0
0
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
UBP31_HUMAN_1008 10 1008 1017 APSHPGSLAK PRIDE
UBP31_HUMAN_1103 12 1103 1114 SQDSVSSPSPQK PRIDE
UBP31_HUMAN_1198 8 1198 1205 SSSMASLR PRIDE
UBP31_HUMAN_1274 17 1274 1290 GHQPPASQQPNANTTGK PRIDE
UBP31_HUMAN_1291 12 1291 1302 EQLVTKDPASAK PRIDE
UBP31_HUMAN_1313 15 1313 1327 SSQLDSGVPSSPGGR PRIDE
UBP31_HUMAN_1337 16 1337 1352 LSSSMQTSARPSQKPQ PRIDE
UBP31_HUMAN_196 13 196 208 ALWTLEYTPQHSR PRIDE
UBP31_HUMAN_336 13 336 348 IGVAVPLSGTVAR PRIDE
UBP31_HUMAN_4 15 4 18 VTAPGSGPPAAASGK PRIDE
UBP31_HUMAN_424 7 424 430 FGLDYHR PRIDE
UBP31_HUMAN_611 8 611 618 LAPDDAWR PRIDE
UBP31_HUMAN_810 16 810 825 TSLASLSESVEMTGER PRIDE
UBP31_HUMAN_826 14 826 839 SEDDGGFSTRPFVR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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