Annotation Detail for INTS2
Basic Information Top
| Gene Symbol: | INTS2 ( INT2,KIAA1287 ) |
|---|---|
| Gene Full Name: | integrator complex subunit 2 |
| Band: | 17q23.2 |
| Quick Links | Entrez ID:57508; OMIM: 611346; Uniprot ID:INT2_HUMAN; ENSEMBL ID: ENSG00000108506; HGNC ID: 29241 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.279646
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 4 / 62319 | 64 |  |
| fetus | 3 / 564012 | 5 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 14 / 1939121 | 7 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 4 / 263845 | 15 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 5 / 95842 | 52 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 36 / 3360307 | 10 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 5 / 125680 | 39 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 3 / 123478 | 24 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 21 / 1100989 | 19 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 8 / 215722 | 37 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 1 / 211054 | 4 | |
| heart | 0 / 89626 | 0 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 5 / 210574 | 23 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 4 / 330442 | 12 | |
| thymus | 4 / 81131 | 49 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_9585_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.46 ± 0.36 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.63 ± 0.17 | |
| Basal Part of Pons | 5.29 ± 0.23 | |
| Cerebellar Cortex | 5.71 ± 0.26 | |
| Cerebellar Nuclei | 5.6 ± 0.62 | |
| Claustrum | 5.54 ± 0.5 | |
| Epithalamus | 6.01 ± 0.35 | |
| Frontal Lobe | 5.38 ± 0.38 | |
| Globus Pallidus | 5.67 ± 0.42 | |
| Hypothalamus | 5.82 ± 0.22 | |
| Insula | 5.29 ± 0.54 | |
| Limbic Lobe | 5.37 ± 0.43 | |
| Mesencephalon | 5.54 ± 0.42 | |
| Myelencephalon | 5.53 ± 0.43 | |
| Occipital Lobe | 5.69 ± 0.34 | |
| Parietal Lobe | 5.48 ± 0.38 | |
| Pontine Tegmentum | 5.51 ± 0.46 | |
| Striatum | 5.53 ± 0.36 | |
| Subthalamus | 5.47 ± 0.57 | |
| Temporal Lobe | 5.51 ± 0.35 | |
| Thalamus | 5.5 ± 0.31 | |
| White Matter | 6.44 ± 0.33 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ints2 | CB | Cerebellum | 1.77 | |
| 1.87 | | |||
| Ints2 | CTX | Cerebral cortex | 3.26 | |
| 2.12 | | |||
| Ints2 | HIP | Hippocampal region | 2.18 | |
| 1.77 | | |||
| Ints2 | HPF | Hippocampal formation | 1.95 | |
| 1.46 | | |||
| Ints2 | HY | Hypothalamus | 0.8 | |
| 0.51 | | |||
| Ints2 | LSX | Lateral septal complex | 1.37 | |
| 0.84 | | |||
| Ints2 | MB | Midbrain | 1.32 | |
| 1.13 | | |||
| Ints2 | MY | Medulla | 4.18 | |
| 3.92 | | |||
| Ints2 | OLF | Olfactory bulb | 5.24 | |
| 4.85 | | |||
| Ints2 | P | Pons | 2.29 | |
| 2.05 | | |||
| Ints2 | PAL | Pallidum | 1.47 | |
| 0.96 | | |||
| Ints2 | RHP | Retrohippocampal region | 1.55 | |
| 1.03 | | |||
| Ints2 | sAMY | Striatum-like amygdalar nuclei | 1.11 | |
| 0.63 | | |||
| Ints2 | STR | Striatum | 0.98 | |
| 0.59 | | |||
| Ints2 | STRd | Striatum dorsal region | 0.88 | |
| 0.55 | | |||
| Ints2 | STRv | Striatum ventral region | 0.98 | |
| 0.52 | | |||
| Ints2 | TH | Thalamus | 1.89 | |
| 1.18 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00096582 | 25 | 288 | 312 | NEACEDGVSDLVCFVSGLLLGTNAK | Peptide Atlas |