Annotation Detail for ARHGAP31
Basic Information Top
| Gene Symbol: | ARHGAP31 ( CDGAP,KIAA1204,MGC138368,MGC138370 ) |
|---|---|
| Gene Full Name: | Rho GTPase activating protein 31 |
| Band: | 3q13.32-q13.33 |
| Quick Links | Entrez ID:57514; OMIM: 610911; Uniprot ID:RHG31_HUMAN; ENSEMBL ID: ENSG00000031081; HGNC ID: 29216 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.668218
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 11 / 564012 | 19 | |
| neonate | 5 / 31097 | 160 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 42 / 1939121 | 21 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 69 / 3360307 | 20 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 |  |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 3 / 123478 | 24 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 27 / 1100989 | 24 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 6 / 211054 | 28 | |
| heart | 2 / 89626 | 22 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 1 / 211777 | 4 | |
| larynx | 0 / 24145 | 0 | |
| liver | 1 / 207743 | 4 | |
| lung | 9 / 336974 | 26 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 3 / 67052 | 44 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 1 / 280825 | 3 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 8 / 210574 | 37 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 6 / 330442 | 18 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 4 / 13680 | 292 |  |
| uterus | 6 / 232878 | 25 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: CUST_5462_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.49 ± 0.86 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.37 ± 0.43 | |
| Basal Part of Pons | 2.78 ± 0.59 | |
| Cerebellar Cortex | 3.03 ± 0.5 | |
| Cerebellar Nuclei | 3.5 ± 0.46 | |
| Claustrum | 3.54 ± 0.76 | |
| Epithalamus | 3.45 ± 0.35 | |
| Frontal Lobe | 3.18 ± 0.52 | |
| Globus Pallidus | 4.69 ± 0.57 | |
| Hypothalamus | 3.25 ± 1.14 | |
| Insula | 3.01 ± 0.55 | |
| Limbic Lobe | 3.22 ± 0.61 | |
| Mesencephalon | 3.38 ± 0.64 | |
| Myelencephalon | 3.34 ± 0.65 | |
| Occipital Lobe | 3.6 ± 0.69 | |
| Parietal Lobe | 3.24 ± 0.65 | |
| Pontine Tegmentum | 3.29 ± 0.54 | |
| Striatum | 3.55 ± 0.68 | |
| Subthalamus | 3.03 ± 0.3 | |
| Temporal Lobe | 3.11 ± 0.62 | |
| Thalamus | 3.54 ± 0.57 | |
| White Matter | 3.92 ± 0.53 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Cdgap | CB | Cerebellum | 22.49 | |
| 82.26 | | |||
| Cdgap | CTX | Cerebral cortex | 10.25 | |
| 7.71 | | |||
| Cdgap | HIP | Hippocampal region | 9.26 | |
| 8.94 | | |||
| Cdgap | HPF | Hippocampal formation | 7.67 | |
| 6.68 | | |||
| Cdgap | HY | Hypothalamus | 1.29 | |
| 1.03 | | |||
| Cdgap | LSX | Lateral septal complex | 3.35 | |
| 2.4 | | |||
| Cdgap | MB | Midbrain | 3.44 | |
| 3.28 | | |||
| Cdgap | MY | Medulla | 6.08 | |
| 7.36 | | |||
| Cdgap | OLF | Olfactory bulb | 7.28 | |
| 6.55 | | |||
| Cdgap | P | Pons | 4.45 | |
| 4.98 | | |||
| Cdgap | PAL | Pallidum | 1.36 | |
| 1.23 | | |||
| Cdgap | RHP | Retrohippocampal region | 5.72 | |
| 4.19 | | |||
| Cdgap | sAMY | Striatum-like amygdalar nuclei | 1.01 | |
| 0.74 | | |||
| Cdgap | STR | Striatum | 2.57 | |
| 1.83 | | |||
| Cdgap | STRd | Striatum dorsal region | 2.71 | |
| 2.03 | | |||
| Cdgap | STRv | Striatum ventral region | 2.48 | |
| 1.45 | | |||
| Cdgap | TH | Thalamus | 3.16 | |
| 2.52 | |