Annotation Detail for NUFIP2
Basic Information Top
| Gene Symbol: | NUFIP2 ( 182-FIP,82-FIP,FIP-82,FLJ10976,KIAA1321,MGC117262 ) |
|---|---|
| Gene Full Name: | nuclear fragile X mental retardation protein interacting protein 2 |
| Band: | 17q11.1 |
| Quick Links | Entrez ID:57532; OMIM: 609356; Uniprot ID:NUFP2_HUMAN; ENSEMBL ID: ENSG00000108256; HGNC ID: 17634 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.462598
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 4 / 62319 | 64 | |
| fetus | 74 / 564012 | 131 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 6 / 55556 | 107 | |
| adult | 169 / 1939121 | 87 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 8 / 17475 | 457 |  |
| breast (mammary gland) tumor | 8 / 94178 | 84 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 9 / 114246 | 78 | |
| esophageal tumor | 2 / 17290 | 115 | |
| gastrointestinal tumor | 5 / 119369 | 41 |  |
| germ cell tumor | 16 / 263845 | 60 | |
| glioma | 1 / 106883 | 9 |  |
| head and neck tumor | 11 / 136302 | 80 | |
| kidney tumor | 4 / 68959 | 58 | |
| leukemia | 7 / 95842 | 73 | |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 10 / 97250 | 102 | |
| normal | 295 / 3360307 | 87 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 6 / 102680 | 58 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 7 / 90257 | 77 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 7 / 29757 | 235 | |
| blood | 1 / 123478 | 8 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 4 / 48801 | 81 | |
| brain | 47 / 1100989 | 42 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 6 / 149255 | 40 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 20 / 215722 | 92 | |
| esophagus | 2 / 20209 | 98 | |
| eye | 19 / 211054 | 90 | |
| heart | 2 / 89626 | 22 | |
| intestine | 17 / 234472 | 72 | |
| kidney | 15 / 211777 | 70 | |
| larynx | 0 / 24145 | 0 | |
| liver | 14 / 207743 | 67 | |
| lung | 21 / 336974 | 62 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 23 / 91610 | 251 | |
| mammary gland | 19 / 153271 | 123 | |
| mouth | 9 / 67052 | 134 | |
| muscle | 13 / 107715 | 120 | |
| nerve | 4 / 15768 | 253 | |
| ovary | 7 / 102051 | 68 | |
| pancreas | 11 / 214812 | 51 | |
| parathyroid | 5 / 20539 | 243 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 39 / 280825 | 138 | |
| prostate | 13 / 189345 | 68 | |
| salivary gland | 2 / 20155 | 99 | |
| skin | 15 / 210574 | 71 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 5 / 96619 | 51 | |
| testis | 17 / 330442 | 51 | |
| thymus | 10 / 81131 | 123 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 18 / 232878 | 77 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_24_P921144
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.7 ± 0.23 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.73 ± 0.16 | |
| Basal Part of Pons | 8.76 ± 0.3 | |
| Cerebellar Cortex | 9.08 ± 0.16 | |
| Cerebellar Nuclei | 8.88 ± 0.17 | |
| Claustrum | 8.98 ± 0.52 | |
| Epithalamus | 8.99 ± 0.33 | |
| Frontal Lobe | 8.81 ± 0.25 | |
| Globus Pallidus | 8.63 ± 0.19 | |
| Hypothalamus | 8.9 ± 0.16 | |
| Insula | 8.87 ± 0.18 | |
| Limbic Lobe | 8.82 ± 0.3 | |
| Mesencephalon | 8.92 ± 0.23 | |
| Myelencephalon | 8.8 ± 0.25 | |
| Occipital Lobe | 9.07 ± 0.2 | |
| Parietal Lobe | 8.9 ± 0.24 | |
| Pontine Tegmentum | 8.84 ± 0.23 | |
| Striatum | 8.68 ± 0.25 | |
| Subthalamus | 8.8 ± 0.5 | |
| Temporal Lobe | 8.78 ± 0.21 | |
| Thalamus | 8.88 ± 0.2 | |
| White Matter | 9.14 ± 0.17 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Nufip2 | CB | Cerebellum | 4.44 | |
| 4.12 | | |||
| Nufip2 | CTX | Cerebral cortex | 1.18 | |
| 1.17 | | |||
| Nufip2 | HIP | Hippocampal region | 2.38 | |
| 2.4 | | |||
| Nufip2 | HPF | Hippocampal formation | 1.69 | |
| 1.57 | | |||
| Nufip2 | HY | Hypothalamus | 0.45 | |
| 0.56 | | |||
| Nufip2 | LSX | Lateral septal complex | 0.06 | |
| 0.03 | | |||
| Nufip2 | MB | Midbrain | 0.42 | |
| 0.54 | | |||
| Nufip2 | MY | Medulla | 1.82 | |
| 2.06 | | |||
| Nufip2 | OLF | Olfactory bulb | 2.88 | |
| 2.09 | | |||
| Nufip2 | P | Pons | 0.9 | |
| 1.16 | | |||
| Nufip2 | PAL | Pallidum | 0.39 | |
| 0.44 | | |||
| Nufip2 | RHP | Retrohippocampal region | 0.59 | |
| 0.48 | | |||
| Nufip2 | sAMY | Striatum-like amygdalar nuclei | 0.02 | |
| 0 | | |||
| Nufip2 | STR | Striatum | 0.47 | |
| 0.45 | | |||
| Nufip2 | STRd | Striatum dorsal region | 0.4 | |
| 0.38 | | |||
| Nufip2 | STRv | Striatum ventral region | 1.12 | |
| 1.09 | | |||
| Nufip2 | TH | Thalamus | 0.26 | |
| 0.3 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00002694 | 11 | 233 | 243 | GCENLNIVQDK | Peptide Atlas |