Annotation Detail for WDR35
Basic Information Top
| Gene Symbol: | WDR35 ( KIAA1336,MGC33196 ) |
|---|---|
| Gene Full Name: | WD repeat domain 35 |
| Band: | 2p24.1 |
| Quick Links | Entrez ID:57539; OMIM: 613602; Uniprot ID:WDR35_HUMAN; ENSEMBL ID: ENSG00000118965; HGNC ID: 29250 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.205427
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 5 / 62319 | 80 | |
| fetus | 9 / 564012 | 15 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 51 / 1939121 | 26 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 6 / 94178 | 63 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 1 / 106883 | 9 |  |
| head and neck tumor | 7 / 136302 | 51 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 69 / 3360307 | 20 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 14 / 1100989 | 12 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 11 / 215722 | 50 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 10 / 211054 | 47 | |
| heart | 0 / 89626 | 0 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 8 / 153271 | 52 | |
| mouth | 3 / 67052 | 44 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 3 / 214812 | 13 | |
| parathyroid | 5 / 20539 | 243 |  |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 1 / 280825 | 3 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 5 / 210574 | 23 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 0 / 96619 | 0 | |
| testis | 27 / 330442 | 81 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 4 / 47473 | 84 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_1420_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.19 ± 0.43 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.22 ± 0.3 | |
| Basal Part of Pons | 4.66 ± 0.7 | |
| Cerebellar Cortex | 4.68 ± 0.32 | |
| Cerebellar Nuclei | 4.66 ± 0.41 | |
| Claustrum | 5.02 ± 0.59 | |
| Epithalamus | 5.93 ± 0.68 | |
| Frontal Lobe | 4.86 ± 0.42 | |
| Globus Pallidus | 5.64 ± 0.23 | |
| Hypothalamus | 5.22 ± 0.4 | |
| Insula | 4.89 ± 0.4 | |
| Limbic Lobe | 5.07 ± 0.42 | |
| Mesencephalon | 5.16 ± 0.43 | |
| Myelencephalon | 5.05 ± 0.49 | |
| Occipital Lobe | 5.36 ± 0.41 | |
| Parietal Lobe | 5.1 ± 0.5 | |
| Pontine Tegmentum | 5.04 ± 0.45 | |
| Striatum | 5.45 ± 0.38 | |
| Subthalamus | 4.59 ± 0.22 | |
| Temporal Lobe | 4.93 ± 0.4 | |
| Thalamus | 4.98 ± 0.32 | |
| White Matter | 5.98 ± 0.29 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Wdr35 | CB | Cerebellum | 14.81 | |
| 19.61 | | |||
| Wdr35 | CTX | Cerebral cortex | 51.93 | |
| 39.98 | | |||
| Wdr35 | HIP | Hippocampal region | 40.65 | |
| 55.47 | | |||
| Wdr35 | HPF | Hippocampal formation | 44.71 | |
| 49.21 | | |||
| Wdr35 | HY | Hypothalamus | 32.97 | |
| 27.2 | | |||
| Wdr35 | LSX | Lateral septal complex | 31.42 | |
| 23.77 | | |||
| Wdr35 | MB | Midbrain | 40.33 | |
| 36.91 | | |||
| Wdr35 | MY | Medulla | 42.42 | |
| 46.68 | | |||
| Wdr35 | OLF | Olfactory bulb | 45.19 | |
| 36.57 | | |||
| Wdr35 | P | Pons | 36.34 | |
| 38.17 | | |||
| Wdr35 | PAL | Pallidum | 35.23 | |
| 30.73 | | |||
| Wdr35 | RHP | Retrohippocampal region | 51.24 | |
| 41.84 | | |||
| Wdr35 | sAMY | Striatum-like amygdalar nuclei | 45.58 | |
| 32.96 | | |||
| Wdr35 | STR | Striatum | 33.98 | |
| 24.47 | | |||
| Wdr35 | STRd | Striatum dorsal region | 29.84 | |
| 21.86 | | |||
| Wdr35 | STRv | Striatum ventral region | 44.72 | |
| 29.49 | | |||
| Wdr35 | TH | Thalamus | 35.88 | |
| 30.76 | |