Annotation Detail for NLGN2
Basic Information Top
| Gene Symbol: | NLGN2 ( KIAA1366 ) |
|---|---|
| Gene Full Name: | neuroligin 2 |
| Band: | 17p13.1 |
| Quick Links | Entrez ID:57555; OMIM: 606479; Uniprot ID:NLGN2_HUMAN; ENSEMBL ID: ENSG00000169992; HGNC ID: 14290 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.26229
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 7 / 70761 | 98 |  |
| blastocyst | 7 / 62319 | 112 | |
| fetus | 26 / 564012 | 46 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 79 / 1939121 | 40 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 8 / 263845 | 30 | |
| glioma | 11 / 106883 | 102 | |
| head and neck tumor | 7 / 136302 | 51 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 1 / 96359 | 10 |  |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 122 / 3360307 | 36 | |
| ovarian tumor | 8 / 76682 | 104 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 34 / 1100989 | 30 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 5 / 149255 | 33 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 19 / 215722 | 88 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 17 / 211054 | 80 | |
| heart | 1 / 89626 | 11 | |
| intestine | 12 / 234472 | 51 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 2 / 24145 | 82 | |
| liver | 1 / 207743 | 4 | |
| lung | 12 / 336974 | 35 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 11 / 102051 | 107 | |
| pancreas | 12 / 214812 | 55 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 7 / 189345 | 36 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 2 / 96619 | 20 | |
| testis | 3 / 330442 | 9 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 10 / 232878 | 42 | |
| vascular | 0 / 51780 | 0 |
- Probe name: CUST_9931_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.98 ± 0.53 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.48 ± 0.21 | |
| Basal Part of Pons | 4.52 ± 0.47 | |
| Cerebellar Cortex | 4.18 ± 0.43 | |
| Cerebellar Nuclei | 4.09 ± 0.53 | |
| Claustrum | 4.89 ± 0.78 | |
| Epithalamus | 3.68 ± 0.18 | |
| Frontal Lobe | 4.29 ± 0.51 | |
| Globus Pallidus | 4.36 ± 0.56 | |
| Hypothalamus | 4.27 ± 0.42 | |
| Insula | 4.37 ± 0.4 | |
| Limbic Lobe | 4.78 ± 0.47 | |
| Mesencephalon | 4.41 ± 0.62 | |
| Myelencephalon | 4.43 ± 0.57 | |
| Occipital Lobe | 4.78 ± 0.63 | |
| Parietal Lobe | 4.53 ± 0.52 | |
| Pontine Tegmentum | 4.46 ± 0.5 | |
| Striatum | 4.94 ± 0.42 | |
| Subthalamus | 4.17 ± 0.59 | |
| Temporal Lobe | 4.42 ± 0.48 | |
| Thalamus | 4.39 ± 0.57 | |
| White Matter | 3.92 ± 0.39 | |
Mouse Brain ISH 