Annotation Detail for ARHGAP21
Basic Information Top
| Gene Symbol: | ARHGAP21 ( ARHGAP10,DKFZp761L0424,FLJ33323,FLJ90108 ) |
|---|---|
| Gene Full Name: | Rho GTPase activating protein 21 |
| Band: | 10p12.1 |
| Quick Links | Entrez ID:57584; OMIM: 609870; Uniprot ID:RHG21_HUMAN; ENSEMBL ID: ENSG00000107863; HGNC ID: 23725 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.524195
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 37 / 564012 | 65 | |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 123 / 1939121 | 63 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 9 / 114246 | 78 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 7 / 119369 | 58 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 8 / 106883 | 74 | |
| head and neck tumor | 11 / 136302 | 80 | |
| kidney tumor | 7 / 68959 | 101 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 189 / 3360307 | 56 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 8 / 104616 | 76 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 6 / 102680 | 58 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 5 / 124949 | 40 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 3 / 33197 | 90 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 2 / 29757 | 67 | |
| blood | 1 / 123478 | 8 |  |
| bone | 4 / 71655 | 55 | |
| bone marrow | 10 / 48801 | 204 |  |
| brain | 91 / 1100989 | 82 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 6 / 16212 | 370 | |
| embryonic tissue | 11 / 215722 | 50 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 8 / 211054 | 37 | |
| heart | 2 / 89626 | 22 | |
| intestine | 14 / 234472 | 59 | |
| kidney | 21 / 211777 | 99 | |
| larynx | 5 / 24145 | 207 | |
| liver | 5 / 207743 | 24 | |
| lung | 14 / 336974 | 41 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 7 / 153271 | 45 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 9 / 214812 | 41 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 19 / 280825 | 67 | |
| prostate | 15 / 189345 | 79 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 8 / 210574 | 37 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 3 / 96619 | 31 | |
| testis | 8 / 330442 | 24 | |
| thymus | 3 / 81131 | 36 | |
| thyroid | 4 / 47473 | 84 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 10 / 232878 | 42 | |
| vascular | 4 / 51780 | 77 | |
Microarray in - Probe name: CUST_6912_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.33 ± 0.34 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.55 ± 0.34 | |
| Basal Part of Pons | 8.1 ± 0.44 | |
| Cerebellar Cortex | 8.13 ± 0.18 | |
| Cerebellar Nuclei | 8.65 ± 0.48 | |
| Claustrum | 8.46 ± 0.37 | |
| Epithalamus | 8.39 ± 0.47 | |
| Frontal Lobe | 8.27 ± 0.42 | |
| Globus Pallidus | 9.46 ± 0.24 | |
| Hypothalamus | 7.75 ± 0.34 | |
| Insula | 8.07 ± 0.42 | |
| Limbic Lobe | 8.42 ± 0.46 | |
| Mesencephalon | 8.31 ± 0.55 | |
| Myelencephalon | 8.4 ± 0.48 | |
| Occipital Lobe | 8.45 ± 0.31 | |
| Parietal Lobe | 8.32 ± 0.42 | |
| Pontine Tegmentum | 8.49 ± 0.33 | |
| Striatum | 8.55 ± 0.47 | |
| Subthalamus | 8.3 ± 0.15 | |
| Temporal Lobe | 8.29 ± 0.41 | |
| Thalamus | 8.41 ± 0.34 | |
| White Matter | 9.99 ± 0.25 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Arhgap21 | CB | Cerebellum | 100 | |
| 100 | | |||
| Arhgap21 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Arhgap21 | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Arhgap21 | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Arhgap21 | HY | Hypothalamus | 100 | |
| 100 | | |||
| Arhgap21 | LSX | Lateral septal complex | 100 | |
| 95.49 | | |||
| Arhgap21 | MB | Midbrain | 100 | |
| 100 | | |||
| Arhgap21 | MY | Medulla | 98.18 | |
| 100 | | |||
| Arhgap21 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Arhgap21 | P | Pons | 99.48 | |
| 100 | | |||
| Arhgap21 | PAL | Pallidum | 100 | |
| 100 | | |||
| Arhgap21 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Arhgap21 | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Arhgap21 | STR | Striatum | 100 | |
| 100 | | |||
| Arhgap21 | STRd | Striatum dorsal region | 100 | |
| 98.87 | | |||
| Arhgap21 | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| Arhgap21 | TH | Thalamus | 100 | |
| 100 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00519478 | 18 | 1034 | 1051 | TIQESSNLNEEDTGVTNR | Peptide Atlas |