AutismKB 2.0

Annotation Detail for CRAMP1L


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Basic Information Top
Gene Symbol:CRAMP1L ( HN1L,MGC176736,TCE4 )
Gene Full Name: Crm, cramped-like (Drosophila)
Band: 16p13.3
Quick LinksEntrez ID:57585; OMIM: NA; Uniprot ID:CRML_HUMAN; ENSEMBL ID: ENSG00000007545; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst7 / 62319112
fetus33 / 56401258
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult77 / 193912139
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor3 / 9417831
cervical tumor2 / 3436658
chondrosarcoma0 / 828230 
colorectal tumor6 / 11424652
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor11 / 26384541
glioma2 / 10688318
head and neck tumor4 / 13630229
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor2 / 9635920
lung tumor9 / 10312787
lymphoma2 / 7175527
non-neoplasia5 / 9725051
normal98 / 336030729
ovarian tumor4 / 7668252
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer7 / 10268068
retinoblastoma2 / 4635643
skin tumor2 / 12494916
soft tissue/muscle tissue tumor4 / 12519131
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder1 / 2975733
blood0 / 1234780 
bone0 / 716550 
bone marrow2 / 4880140
brain25 / 110098922
cervix2 / 4817141
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue13 / 21572260
esophagus0 / 202090 
eye7 / 21105433
heart0 / 896260 
intestine9 / 23447238
kidney5 / 21177723
larynx2 / 2414582
liver2 / 2077439
lung19 / 33697456
lymph1 / 4427022
lymph node8 / 9161087
mammary gland4 / 15327126
mouth1 / 6705214
muscle4 / 10771537
nerve0 / 157680 
ovary7 / 10205168
pancreas3 / 21481213
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta5 / 28082517
prostate7 / 18934536
salivary gland0 / 201550 
skin6 / 21057428
spleen0 / 539520 
stomach2 / 9661920
testis15 / 33044245
thymus1 / 8113112
thyroid5 / 47473105
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus8 / 23287834
vascular1 / 5178019
Microarray in BioGPS Top
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P407992
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.57 ± 0.8
Basal Forebrain3.39 ± 0.32
Basal Part of Pons3.21 ± 0.7
Cerebellar Cortex3.96 ± 0.28
Cerebellar Nuclei3.26 ± 0.57
Claustrum3.81 ± 0.86
Epithalamus3.37 ± 0.73
Frontal Lobe3.24 ± 0.6
Globus Pallidus2.95 ± 0.65
Hypothalamus2.98 ± 0.51
Insula3.53 ± 0.6
Limbic Lobe3.54 ± 0.67
Mesencephalon3.49 ± 0.72
Myelencephalon3.34 ± 0.65
Occipital Lobe3.67 ± 0.81
Parietal Lobe3.46 ± 0.64
Pontine Tegmentum3.37 ± 0.59
Striatum2.99 ± 0.6
Subthalamus3.42 ± 0.63
Temporal Lobe3.22 ± 0.66
Thalamus3.31 ± 0.66
White Matter3.11 ± 0.95
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Cramp1lCBCerebellum54.16
64.75
Cramp1lCTXCerebral cortex94.89
69.38
Cramp1lHIPHippocampal region74.52
100
Cramp1lHPFHippocampal formation74
90.97
Cramp1lHYHypothalamus49.46
33.74
Cramp1lLSXLateral septal complex77.46
53.75
Cramp1lMBMidbrain58.46
47.08
Cramp1lMYMedulla60.92
58.61
Cramp1lOLFOlfactory bulb87.69
70.65
Cramp1lPPons54.09
47.55
Cramp1lPALPallidum46.44
35.64
Cramp1lRHPRetrohippocampal region73.96
56.27
Cramp1lsAMYStriatum-like amygdalar nuclei69.78
46.28
Cramp1lSTRStriatum51.44
34.38
Cramp1lSTRdStriatum dorsal region42.91
29.18
Cramp1lSTRvStriatum ventral region53.98
33.52
Cramp1lTHThalamus70.58
51.78
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
CRML_HUMAN_1119 8 1119 1126 LNGSDSSK PRIDE
CRML_HUMAN_122 9 122 130 AQLWLSISR PRIDE
CRML_HUMAN_1233 15 1233 1247 FNDLAQELSIAEPGR PRIDE
CRML_HUMAN_169 12 169 180 NTFFEGLYEHGK PRIDE
CRML_HUMAN_197 8 197 204 GKPASMVK PRIDE
CRML_HUMAN_318 8 318 325 VPIELQPR PRIDE
CRML_HUMAN_351 10 351 360 KVSSLIEFLK PRIDE
CRML_HUMAN_352 9 352 360 VSSLIEFLK PRIDE
CRML_HUMAN_417 12 417 428 AFCTVHWQEGGR PRIDE
CRML_HUMAN_54 31 54 84 AGADGPPAPPGAPQAPSPPQGSPQDQHHFLR PRIDE
CRML_HUMAN_628 13 628 640 DLADAPAEELQEK PRIDE
CRML_HUMAN_698 12 698 709 LQLEYDWLGPGR PRIDE
CRML_HUMAN_710 14 710 723 QDPRPGSLPTALHK PRIDE
CRML_HUMAN_733 9 733 741 LISTEVNPK PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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