AutismKB 2.0

Annotation Detail for C8orf79


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:C8orf79 ( FLJ36980,KIAA1456,MGC43113 )
Gene Full Name: chromosome 8 open reading frame 79
Band: 8p22
Quick LinksEntrez ID:57604; OMIM: NA; Uniprot ID:K1456_HUMAN; ENSEMBL ID: ENSG00000170941,ENSG00000250305; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus15 / 56401226
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult34 / 193912117
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor1 / 2638453
glioma0 / 1068830 
head and neck tumor8 / 13630258
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia5 / 9725051
normal78 / 336030723
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer0 / 1026800 
retinoblastoma1 / 4635621
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone2 / 7165527
bone marrow0 / 488010 
brain36 / 110098932
cervix0 / 481710 
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye4 / 21105418
heart1 / 8962611
intestine1 / 2344724
kidney3 / 21177714
larynx0 / 241450 
liver3 / 20774314
lung9 / 33697426
lymph0 / 442700 
lymph node0 / 916100 
mammary gland1 / 1532716
mouth0 / 670520 
muscle1 / 1077159
nerve0 / 157680 
ovary0 / 1020510 
pancreas14 / 21481265
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta5 / 28082517
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid11 / 47473231
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 214796_at
Cell line Expression level Expression bar
721_B_lymphoblasts8.25
Adipocyte7.65
AdrenalCortex9.75
Adrenalgland7
Amygdala8.4
Appendix10.15
AtrioventricularNode7.4
BDCA4+_DentriticCells7.4
Bonemarrow9.15
BronchialEpithelialCells7.45
CD105+_Endothelial7.7
CD14+_Monocytes8.4
CD19+_BCells(neg._sel.)7.9
CD33+_Myeloid9.35
CD34+9.05
CD4+_Tcells7.6
CD56+_NKCells8.4
CD71+_EarlyErythroid7.55
CD8+_Tcells6.75
CardiacMyocytes15.45
Caudatenucleus7.15
Cerebellum9.15
CerebellumPeduncles10.05
CiliaryGanglion6.2
CingulateCortex8.45
Colorectaladenocarcinoma7.9
DorsalRootGanglion6.95
FetalThyroid8.1
Fetalbrain8.7
Fetalliver7.25
Fetallung6.1
GlobusPallidus5.95
Heart13.5
Hypothalamus8.2
Kidney7.6
Leukemia_chronicMyelogenousK-5627.05
Leukemia_promyelocytic-HL-607
Leukemialymphoblastic(MOLT-4)6.5
Liver10.7
Lung8.6
Lymphnode6.85
Lymphoma_burkitts(Daudi)10.7
Lymphoma_burkitts(Raji)12.6
MedullaOblongata7.35
OccipitalLobe6.95
OlfactoryBulb6.3
Ovary6.3
Pancreas6.9
PancreaticIslet8.6
ParietalLobe9.35
Pituitary9.5
Placenta7.6
Pons8.1
PrefrontalCortex9
Prostate9.15
Salivarygland6.45
SkeletalMuscle13.35
Skin7.05
SmoothMuscle9.05
Spinalcord8.35
SubthalamicNucleus7.45
SuperiorCervicalGanglion12.95
TemporalLobe7.65
Testis7.35
TestisGermCell6.45
TestisIntersitial6.75
TestisLeydigCell8.5
TestisSeminiferousTubule6.95
Thalamus8.35
Thymus5.95
Thyroid9.85
Tongue9.4
Tonsil8
Trachea7.25
TrigeminalGanglion9.2
Uterus6.1
UterusCorpus8.5
WholeBlood8.45
Wholebrain6
colon7.85
pineal_day10.9
pineal_night10.86
retina9.65
small_intestine7.4
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P920025
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.2 ± 0.54
Basal Forebrain6.67 ± 0.61
Basal Part of Pons6.78 ± 0.5
Cerebellar Cortex7.39 ± 0.41
Cerebellar Nuclei5.85 ± 0.48
Claustrum4.81 ± 0.68
Epithalamus7.02 ± 0.63
Frontal Lobe6.39 ± 0.62
Globus Pallidus5.13 ± 0.62
Hypothalamus5.36 ± 0.91
Insula6.15 ± 0.41
Limbic Lobe6.72 ± 0.88
Mesencephalon6.31 ± 0.79
Myelencephalon6.38 ± 0.7
Occipital Lobe7.54 ± 0.76
Parietal Lobe6.68 ± 0.55
Pontine Tegmentum6.43 ± 0.85
Striatum5.99 ± 0.47
Subthalamus6.12 ± 1.15
Temporal Lobe6.26 ± 0.76
Thalamus6.81 ± 0.54
White Matter4.2 ± 0.53
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
6430573F11RikCBCerebellum52.73
48.35
6430573F11RikCTXCerebral cortex15.53
11.05
6430573F11RikHIPHippocampal region1.6
1.19
6430573F11RikHPFHippocampal formation13.58
11.85
6430573F11RikHYHypothalamus0.28
0.16
6430573F11RikLSXLateral septal complex4.75
2.09
6430573F11RikMBMidbrain1.79
1.49
6430573F11RikMYMedulla6.18
5.23
6430573F11RikOLFOlfactory bulb42.18
29.98
6430573F11RikPPons1.42
0.83
6430573F11RikPALPallidum1.14
0.74
6430573F11RikRHPRetrohippocampal region27.15
21.51
6430573F11RiksAMYStriatum-like amygdalar nuclei0.37
0.16
6430573F11RikSTRStriatum1.5
1
6430573F11RikSTRdStriatum dorsal region0.37
0.25
6430573F11RikSTRvStriatum ventral region3.83
2.58
6430573F11RikTHThalamus0.84
0.35
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved