Annotation Detail for PITPNM2
Basic Information Top
| Gene Symbol: | PITPNM2 ( KIAA1457,NIR3,RDGB2,RDGBA2 ) |
|---|---|
| Gene Full Name: | phosphatidylinositol transfer protein, membrane-associated 2 |
| Band: | 12q24.31 |
| Quick Links | Entrez ID:57605; OMIM: 608920; Uniprot ID:PITM2_HUMAN; ENSEMBL ID: ENSG00000090975; HGNC ID: 21044 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.272759
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 5 / 564012 | 8 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 42 / 1939121 | 21 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 |  |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 7 / 263845 | 26 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 43 / 3360307 | 12 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 9 / 1100989 | 8 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 10 / 211054 | 47 | |
| heart | 2 / 89626 | 22 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 1 / 211777 | 4 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 3 / 214812 | 13 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 3 / 280825 | 10 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 7 / 330442 | 21 | |
| thymus | 14 / 81131 | 172 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P401361
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.18 ± 0.53 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.32 ± 0.64 | |
| Basal Part of Pons | 5.33 ± 0.82 | |
| Cerebellar Cortex | 5.24 ± 0.35 | |
| Cerebellar Nuclei | 4.55 ± 0.67 | |
| Claustrum | 6.29 ± 0.54 | |
| Epithalamus | 4.91 ± 0.58 | |
| Frontal Lobe | 5.89 ± 0.65 | |
| Globus Pallidus | 3.91 ± 1.05 | |
| Hypothalamus | 5.38 ± 0.54 | |
| Insula | 6.37 ± 0.42 | |
| Limbic Lobe | 5.95 ± 0.77 | |
| Mesencephalon | 5.51 ± 0.75 | |
| Myelencephalon | 5.5 ± 0.63 | |
| Occipital Lobe | 5.08 ± 0.89 | |
| Parietal Lobe | 5.79 ± 0.53 | |
| Pontine Tegmentum | 5.6 ± 0.71 | |
| Striatum | 5.23 ± 1.23 | |
| Subthalamus | 4.95 ± 0.98 | |
| Temporal Lobe | 6.11 ± 0.44 | |
| Thalamus | 5.34 ± 0.48 | |
| White Matter | 3.36 ± 0.21 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Pitpnm2 | CB | Cerebellum | 6.55 | |
| 8.37 | | |||
| Pitpnm2 | CTX | Cerebral cortex | 32.25 | |
| 27.11 | | |||
| Pitpnm2 | HIP | Hippocampal region | 34.87 | |
| 50 | | |||
| Pitpnm2 | HPF | Hippocampal formation | 24.6 | |
| 32.89 | | |||
| Pitpnm2 | HY | Hypothalamus | 0.4 | |
| 0.35 | | |||
| Pitpnm2 | LSX | Lateral septal complex | 2.87 | |
| 2.02 | | |||
| Pitpnm2 | MB | Midbrain | 1.25 | |
| 1.23 | | |||
| Pitpnm2 | MY | Medulla | 2.25 | |
| 2.32 | | |||
| Pitpnm2 | OLF | Olfactory bulb | 32.34 | |
| 34.98 | | |||
| Pitpnm2 | P | Pons | 1.11 | |
| 1.05 | | |||
| Pitpnm2 | PAL | Pallidum | 2.81 | |
| 2.4 | | |||
| Pitpnm2 | RHP | Retrohippocampal region | 12.96 | |
| 10.85 | | |||
| Pitpnm2 | sAMY | Striatum-like amygdalar nuclei | 2.46 | |
| 1.83 | | |||
| Pitpnm2 | STR | Striatum | 13.6 | |
| 10.66 | | |||
| Pitpnm2 | STRd | Striatum dorsal region | 9.69 | |
| 7.08 | | |||
| Pitpnm2 | STRv | Striatum ventral region | 36.57 | |
| 28.47 | | |||
| Pitpnm2 | TH | Thalamus | 5.66 | |
| 7.29 | |