AutismKB 2.0

Annotation Detail for PTMS


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Basic Information Top
Gene Symbol:PTMS ( ParaT )
Gene Full Name: parathymosin
Band: 12p13
Quick LinksEntrez ID:5763; OMIM: 168440; Uniprot ID:PTMS_HUMAN; ENSEMBL ID: ENSG00000159335; HGNC ID: 9629
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body7 / 7076198
blastocyst2 / 6231932
fetus34 / 56401260
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult97 / 193912150
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor7 / 9417874
cervical tumor2 / 3436658
chondrosarcoma11 / 82823132
colorectal tumor6 / 11424652
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor4 / 26384515
glioma11 / 106883102
head and neck tumor11 / 13630280
kidney tumor6 / 6895987
leukemia0 / 958420 
liver tumor2 / 9635920
lung tumor8 / 10312777
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal141 / 336030741
ovarian tumor5 / 7668265
pancreatic tumor8 / 10461676
primitive neuroectodermal tumor of the CNS6 / 12568047
prostate cancer4 / 10268038
retinoblastoma5 / 46356107
skin tumor11 / 12494988
soft tissue/muscle tissue tumor11 / 12519187
uterine tumor7 / 9025777
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites1 / 4001524
bladder0 / 297570 
blood0 / 1234780 
bone17 / 71655237
bone marrow0 / 488010 
brain32 / 110098929
cervix2 / 4817141
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue15 / 21572269
esophagus0 / 202090 
eye35 / 211054165
heart4 / 8962644
intestine11 / 23447246
kidney8 / 21177737
larynx1 / 2414541
liver6 / 20774328
lung21 / 33697462
lymph0 / 442700 
lymph node0 / 916100 
mammary gland13 / 15327184
mouth0 / 670520 
muscle1 / 1077159
nerve1 / 1576863
ovary7 / 10205168
pancreas15 / 21481269
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta1 / 2808253
prostate5 / 18934526
salivary gland7 / 20155347
skin15 / 21057471
spleen1 / 5395218
stomach1 / 9661910
testis4 / 33044212
thymus1 / 8113112
thyroid5 / 47473105
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus21 / 23287890
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: Primary tumors (U95A)
  • Affymatrix Probe ID: 40580_r_at
Cell line Expression level Expression bar
Pr1T85.134
Pr4T42.924
Pr5T45.064
Pr7T19.537
Pr1N16.182
Pr5N16.336
Pr6T21.766
Pr3N29.372
Pr3T36.168
Pr4N29.644
Pr2N24.95
Pr8N21.403
Pr8T22.028
Pr9N22.909
Pr10N16.425
Pr10T16.997
Pr9T30.398
Pr11T77.442
Pr12T21.819
Pr13AT27.49
Pr13BT34.261
Pr21T23.24
Pr22T36.802
Pr30T21.096
Pr23T17.093
Pr19T46.236
Pr26T27.419
Pr31T15.895
Pr16T37.021
Pr17T13.598
Pr24T30.765
Pr27T91.51
Pr29T51.45
OVR10215.035
HUOVR18.666
G218.727
G322.572
G511.246
G611.589
G841.692
G98.421
CO7T10.837
CO8T10.898
CO15T7.48
CO27T5.747
CO30T7.731
CO32T11.092
CO40T7.423
CO52N8.217
CO62N12.038
K122.719
K211.185
K310.922
K411.654
K14N11.767
K1611.583
K179.915
K1911.43
K2011.415
K2211.819
CO9T11.183
CO20T11.375
CO24T10.948
CO36N11.64
K1812.537
P1N11.062
P2N8.845
P5N10.371
P89.97
P1121.671
P178.965
K2111.455
K25N11.683
K28N11.637
CO42T9.967
P2211.179
P13N11.415
LU11T12.32
LU16T11.023
LU7T10.957
LU8T11.071
LU12T15.014
LU13T11.175
LU5T9.718
LU6T10.994
LU14T9.107
LU17T9.354
LU50N11.135
LU52N11.683
LU18T12.084
LU55N11.279
LU3N11.699
P16B12.214
P2310.788
OVR1611.421
OVR1911.388
OVR2716.586
OVR28215.464
OVR278E11.672
OVR211.439
OVR521.145
OVR821.681
OVR1112.244
OVR1222.248
OVR1311.314
OVR2218.832
OVR2611.737
OVR1014.873
OVR278S11.851
OVR118.778
LU19T14.389
LU20T11.418
LU24T13.025
LU25T15.536
LU31T11.283
LU34T13.83
LU39T7.018
CO14T14.835
CO21T10.614
CO23T7.448
CO41N11.013
LU40T11.647
LU41T14.009
LU44T6.1
LU46T15.621
LU49T9.928
L5N16.362
LU42T20.261
LU30T11.3
LU43T9.038
CO5T11.124
CO44T11.252
CO49T9.938
CO51T11.295
CO56T10.32
CO61T22.117
LU26T11.101
LU33T11.67
LU36T11.24
CO43T8.099
G1811.805
G4611.564
L11T17.988
L13N23.473
L30T11.148
L31T10.063
L32T11.826
L34T11.812
L35T12.935
B1N8.934
B5N9.894
B8T13.81
B10T21.401
B14T11.611
B16T10.962
B17T11.047
B1NR11.366
B20T11.747
B51NR11.337
B6T17.023
B15T10.365
B21T11.781
B29T11.571
B31T9.009
B32T7.335
B24T10.821
B46T10.532
B34T12.346
B36T10.077
B37T11.403
B38T9.998
B39T14.253
X10210.51
X116_0210.067
G2807.126
X467.695
X5811.423
G1866.926
G2969.688
L38T11.538
L31T.25.225
L26N11.667
N257ANTR14.643
N285BODY6.728
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_12712_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala16.39 ± 0.4
Basal Forebrain16.24 ± 0.12
Basal Part of Pons16.46 ± 0.23
Cerebellar Cortex16.02 ± 0.23
Cerebellar Nuclei16.4 ± 0.27
Claustrum16.46 ± 0.34
Epithalamus16.01 ± 0.12
Frontal Lobe16.27 ± 0.35
Globus Pallidus16.77 ± 0.25
Hypothalamus16.24 ± 0.4
Insula16.18 ± 0.28
Limbic Lobe16.37 ± 0.38
Mesencephalon16.3 ± 0.31
Myelencephalon16.34 ± 0.37
Occipital Lobe16.28 ± 0.36
Parietal Lobe16.2 ± 0.31
Pontine Tegmentum16.14 ± 0.34
Striatum16.56 ± 0.34
Subthalamus16.11 ± 0.37
Temporal Lobe16.28 ± 0.33
Thalamus16.33 ± 0.33
White Matter16.82 ± 0.06
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
PtmsCBCerebellum100
100
PtmsCTXCerebral cortex100
100
PtmsHIPHippocampal region93.17
100
PtmsHPFHippocampal formation100
100
PtmsHYHypothalamus68.53
56.09
PtmsLSXLateral septal complex100
100
PtmsMBMidbrain82.23
77
PtmsMYMedulla66.18
74.78
PtmsOLFOlfactory bulb100
100
PtmsPPons64.78
66.44
PtmsPALPallidum86.95
87.82
PtmsRHPRetrohippocampal region100
100
PtmssAMYStriatum-like amygdalar nuclei100
99.25
PtmsSTRStriatum100
100
PtmsSTRdStriatum dorsal region100
100
PtmsSTRvStriatum ventral region100
100
PtmsTHThalamus90.76
94.69
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00004391 22 34 55 KKEVVEEEENGAEEEEEETAED Peptide Atlas
PTMS_HUMAN_0 0 0 0 SVEAAAELSAK PRIDE
PTMS_HUMAN_1 29 1 29 SEKSVEAAAELSAKDLKEKKEKVEEKASR PRIDE
PTMS_HUMAN_19 11 19 29 KKEKVEEKASR PRIDE
PTMS_HUMAN_4 11 4 14 SVEAAAELSAK PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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