Annotation Detail for ARHGAP23
Basic Information Top
| Gene Symbol: | ARHGAP23 ( KIAA1501 ) |
|---|---|
| Gene Full Name: | Rho GTPase activating protein 23 |
| Band: | 17q12 |
| Quick Links | Entrez ID:57636; OMIM: 610590; Uniprot ID:RHG23_HUMAN; ENSEMBL ID: ENSG00000225485; HGNC ID: 29293 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.374446
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 8 / 70761 | 113 |  |
| blastocyst | 3 / 62319 | 48 |  |
| fetus | 17 / 564012 | 30 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 106 / 1939121 | 54 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 7 / 94178 | 74 | |
| cervical tumor | 4 / 34366 | 116 | |
| chondrosarcoma | 6 / 82823 | 72 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 4 / 263845 | 15 | |
| glioma | 8 / 106883 | 74 | |
| head and neck tumor | 35 / 136302 | 256 |  |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 1 / 95842 | 10 |  |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 8 / 97250 | 82 | |
| normal | 108 / 3360307 | 32 | |
| ovarian tumor | 9 / 76682 | 117 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 3 / 29757 | 100 | |
| blood | 0 / 123478 | 0 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 35 / 1100989 | 31 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 6 / 149255 | 40 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 11 / 215722 | 50 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 6 / 211054 | 28 | |
| heart | 5 / 89626 | 55 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 2 / 24145 | 82 | |
| liver | 2 / 207743 | 9 | |
| lung | 16 / 336974 | 47 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 8 / 153271 | 52 | |
| mouth | 22 / 67052 | 328 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 11 / 102051 | 107 | |
| pancreas | 3 / 214812 | 13 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 9 / 280825 | 32 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 8 / 20155 | 396 | |
| skin | 0 / 210574 | 0 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 1 / 96619 | 10 | |
| testis | 1 / 330442 | 3 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 0 / 51780 | 0 |
- Probe name: CUST_4013_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.53 ± 0.54 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.14 ± 0.48 | |
| Basal Part of Pons | 7.48 ± 0.38 | |
| Cerebellar Cortex | 7.31 ± 0.24 | |
| Cerebellar Nuclei | 8.17 ± 0.51 | |
| Claustrum | 8.18 ± 0.4 | |
| Epithalamus | 6.71 ± 0.91 | |
| Frontal Lobe | 7.44 ± 0.67 | |
| Globus Pallidus | 9.16 ± 0.32 | |
| Hypothalamus | 7.32 ± 0.55 | |
| Insula | 7.38 ± 0.41 | |
| Limbic Lobe | 7.44 ± 0.76 | |
| Mesencephalon | 7.85 ± 0.48 | |
| Myelencephalon | 7.62 ± 0.67 | |
| Occipital Lobe | 7.56 ± 0.53 | |
| Parietal Lobe | 7.47 ± 0.62 | |
| Pontine Tegmentum | 7.66 ± 0.56 | |
| Striatum | 7.74 ± 0.7 | |
| Subthalamus | 7.94 ± 0.24 | |
| Temporal Lobe | 7.4 ± 0.58 | |
| Thalamus | 7.83 ± 0.38 | |
| White Matter | 9.9 ± 0.7 | |
Mouse Brain ISH 