Annotation Detail for GPAM
Basic Information Top
| Gene Symbol: | GPAM ( GPAT,GPAT1,KIAA1560,MGC26846 ) |
|---|---|
| Gene Full Name: | glycerol-3-phosphate acyltransferase, mitochondrial |
| Band: | 10q25.2 |
| Quick Links | Entrez ID:57678; OMIM: 602395; Uniprot ID:GPAT1_HUMAN; ENSEMBL ID: ENSG00000119927; HGNC ID: 24865 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.42586
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 57 / 564012 | 101 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 66 / 1939121 | 34 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 2 / 263845 | 7 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 12 / 96359 | 124 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 4 / 71755 | 55 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 189 / 3360307 | 56 | |
| ovarian tumor | 4 / 76682 | 52 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 7 / 90257 | 77 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 19 / 13106 | 1449 |  |
| adrenal gland | 4 / 33197 | 120 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 39 / 1100989 | 35 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 3 / 211054 | 14 | |
| heart | 4 / 89626 | 44 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 0 / 24145 | 0 | |
| liver | 24 / 207743 | 115 | |
| lung | 3 / 336974 | 8 | |
| lymph | 4 / 44270 | 90 | |
| lymph node | 11 / 91610 | 120 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 7 / 210574 | 33 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 11 / 330442 | 33 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 15 / 232878 | 64 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_23_P104237
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.13 ± 0.65 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.12 ± 0.15 | |
| Basal Part of Pons | 3.57 ± 0.66 | |
| Cerebellar Cortex | 3.76 ± 0.62 | |
| Cerebellar Nuclei | 4.17 ± 0.77 | |
| Claustrum | 4.58 ± 0.62 | |
| Epithalamus | 4.05 ± 0.97 | |
| Frontal Lobe | 4.26 ± 0.73 | |
| Globus Pallidus | 6.21 ± 0.51 | |
| Hypothalamus | 4.35 ± 0.7 | |
| Insula | 4.45 ± 0.53 | |
| Limbic Lobe | 4.23 ± 0.72 | |
| Mesencephalon | 4.86 ± 0.55 | |
| Myelencephalon | 4.56 ± 0.82 | |
| Occipital Lobe | 4.78 ± 0.72 | |
| Parietal Lobe | 4.65 ± 0.73 | |
| Pontine Tegmentum | 4.76 ± 0.69 | |
| Striatum | 5.46 ± 0.45 | |
| Subthalamus | 4.42 ± 0.72 | |
| Temporal Lobe | 4.35 ± 0.73 | |
| Thalamus | 5 ± 0.48 | |
| White Matter | 4.38 ± 0.41 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Gpam | CB | Cerebellum | 9.92 | |
| 11.77 | | |||
| Gpam | CTX | Cerebral cortex | 8.53 | |
| 6.94 | | |||
| Gpam | HIP | Hippocampal region | 5.03 | |
| 4.47 | | |||
| Gpam | HPF | Hippocampal formation | 5.32 | |
| 4.38 | | |||
| Gpam | HY | Hypothalamus | 0.44 | |
| 0.68 | | |||
| Gpam | LSX | Lateral septal complex | 0.87 | |
| 0.79 | | |||
| Gpam | MB | Midbrain | 2.96 | |
| 4.09 | | |||
| Gpam | MY | Medulla | 3.43 | |
| 4.5 | | |||
| Gpam | OLF | Olfactory bulb | 7.17 | |
| 5.04 | | |||
| Gpam | P | Pons | 2.37 | |
| 3.44 | | |||
| Gpam | PAL | Pallidum | 0.57 | |
| 0.39 | | |||
| Gpam | RHP | Retrohippocampal region | 6.11 | |
| 4.48 | | |||
| Gpam | sAMY | Striatum-like amygdalar nuclei | 0.76 | |
| 0.71 | | |||
| Gpam | STR | Striatum | 1.58 | |
| 1.15 | | |||
| Gpam | STRd | Striatum dorsal region | 1.86 | |
| 1.34 | | |||
| Gpam | STRv | Striatum ventral region | 1.09 | |
| 0.7 | | |||
| Gpam | TH | Thalamus | 1.45 | |
| 1.18 | |