Annotation Detail for FAM160B1
Basic Information Top
| Gene Symbol: | FAM160B1 ( DKFZp686D10123,KIAA1600,bA106M7.3 ) |
|---|---|
| Gene Full Name: | family with sequence similarity 160, member B1 |
| Band: | 10q25.3 |
| Quick Links | Entrez ID:57700; OMIM: NA; Uniprot ID:F16B1_HUMAN; ENSEMBL ID: ENSG00000151553; HGNC ID: 29320 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.192619
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 15 / 564012 | 26 | |
| neonate | 3 / 31097 | 96 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 53 / 1939121 | 27 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 99 / 3360307 | 29 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 1 / 123478 | 8 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 16 / 1100989 | 14 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 8 / 211054 | 37 | |
| heart | 1 / 89626 | 11 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 8 / 211777 | 37 | |
| larynx | 1 / 24145 | 41 | |
| liver | 2 / 207743 | 9 | |
| lung | 4 / 336974 | 11 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 12 / 280825 | 42 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 4 / 210574 | 18 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 8 / 330442 | 24 | |
| thymus | 3 / 81131 | 36 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 9 / 232878 | 38 | |
| vascular | 3 / 51780 | 57 | |
Microarray in - Probe name: A_32_P26895
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 9.04 ± 0.34 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 9.16 ± 0.2 | |
| Basal Part of Pons | 9.32 ± 0.24 | |
| Cerebellar Cortex | 9.18 ± 0.21 | |
| Cerebellar Nuclei | 8.95 ± 0.31 | |
| Claustrum | 9.26 ± 0.3 | |
| Epithalamus | 9.01 ± 0.29 | |
| Frontal Lobe | 9.26 ± 0.22 | |
| Globus Pallidus | 8.4 ± 0.19 | |
| Hypothalamus | 9.1 ± 0.18 | |
| Insula | 9.28 ± 0.09 | |
| Limbic Lobe | 9.21 ± 0.26 | |
| Mesencephalon | 9 ± 0.23 | |
| Myelencephalon | 9.12 ± 0.28 | |
| Occipital Lobe | 8.9 ± 0.3 | |
| Parietal Lobe | 9.15 ± 0.28 | |
| Pontine Tegmentum | 9.11 ± 0.31 | |
| Striatum | 9.28 ± 0.3 | |
| Subthalamus | 9.15 ± 0.29 | |
| Temporal Lobe | 9.26 ± 0.24 | |
| Thalamus | 9.06 ± 0.2 | |
| White Matter | 8.34 ± 0.22 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| AI450540 | CB | Cerebellum | 23.75 | |
| 26.6 | | |||
| AI450540 | CTX | Cerebral cortex | 50.97 | |
| 35.69 | | |||
| AI450540 | HIP | Hippocampal region | 31.23 | |
| 41.39 | | |||
| AI450540 | HPF | Hippocampal formation | 29.12 | |
| 31.82 | | |||
| AI450540 | HY | Hypothalamus | 27.34 | |
| 20.27 | | |||
| AI450540 | LSX | Lateral septal complex | 22.6 | |
| 16.16 | | |||
| AI450540 | MB | Midbrain | 25.2 | |
| 22.24 | | |||
| AI450540 | MY | Medulla | 27.73 | |
| 28.52 | | |||
| AI450540 | OLF | Olfactory bulb | 43.34 | |
| 35.49 | | |||
| AI450540 | P | Pons | 36.05 | |
| 35.54 | | |||
| AI450540 | PAL | Pallidum | 22.18 | |
| 17.98 | | |||
| AI450540 | RHP | Retrohippocampal region | 24.37 | |
| 16.46 | | |||
| AI450540 | sAMY | Striatum-like amygdalar nuclei | 21.06 | |
| 14.64 | | |||
| AI450540 | STR | Striatum | 22.09 | |
| 15.43 | | |||
| AI450540 | STRd | Striatum dorsal region | 21.24 | |
| 15.29 | | |||
| AI450540 | STRv | Striatum ventral region | 25.5 | |
| 15.89 | | |||
| AI450540 | TH | Thalamus | 37.03 | |
| 28.65 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00024470 | 14 | 624 | 637 | CNLEAAFFEGHFLK | Peptide Atlas |