AutismKB 2.0

Annotation Detail for CYP4F11


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Basic Information Top
Gene Symbol:CYP4F11 ( CYPIVF11 )
Gene Full Name: cytochrome P450, family 4, subfamily F, polypeptide 11
Band: 19p13.12
Quick LinksEntrez ID:57834; OMIM: 611517; Uniprot ID:CP4FB_HUMAN; ENSEMBL ID: ENSG00000171903; HGNC ID: 13265
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult25 / 193912112
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor3 / 11424626
esophageal tumor6 / 17290347
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma2 / 10688318
head and neck tumor15 / 136302110
kidney tumor4 / 6895958
leukemia0 / 958420 
liver tumor4 / 9635941
lung tumor4 / 10312738
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal18 / 33603075
ovarian tumor1 / 7668213
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain8 / 11009897
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus6 / 20209296
eye3 / 21105414
heart0 / 896260 
intestine3 / 23447212
kidney5 / 21177723
larynx1 / 2414541
liver8 / 20774338
lung8 / 33697423
lymph0 / 442700 
lymph node0 / 916100 
mammary gland3 / 15327119
mouth14 / 67052208
muscle0 / 1077150 
nerve0 / 157680 
ovary1 / 1020519
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland2 / 16585120
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 206153_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.65
Adipocyte6.75
AdrenalCortex9.25
Adrenalgland6.2
Amygdala6.95
Appendix8.55
AtrioventricularNode6.4
BDCA4+_DentriticCells6.45
Bonemarrow7.7
BronchialEpithelialCells6.6
CD105+_Endothelial6.65
CD14+_Monocytes7.15
CD19+_BCells(neg._sel.)6.8
CD33+_Myeloid8.45
CD34+7.95
CD4+_Tcells7
CD56+_NKCells7.35
CD71+_EarlyErythroid6.6
CD8+_Tcells5.75
CardiacMyocytes9.75
Caudatenucleus6.1
Cerebellum5.75
CerebellumPeduncles8.25
CiliaryGanglion5.8
CingulateCortex7.4
Colorectaladenocarcinoma6.8
DorsalRootGanglion7.65
FetalThyroid7.15
Fetalbrain6.7
Fetalliver6.05
Fetallung5.3
GlobusPallidus5.5
Heart9.75
Hypothalamus7.15
Kidney7.05
Leukemia_chronicMyelogenousK-5625.9
Leukemia_promyelocytic-HL-606
Leukemialymphoblastic(MOLT-4)5.35
Liver343.15
Lung7.45
Lymphnode5.6
Lymphoma_burkitts(Daudi)9.1
Lymphoma_burkitts(Raji)10.05
MedullaOblongata6.25
OccipitalLobe8.05
OlfactoryBulb5.3
Ovary5.5
Pancreas5.65
PancreaticIslet7.65
ParietalLobe7.6
Pituitary8.1
Placenta6.55
Pons9.3
PrefrontalCortex7.95
Prostate7.75
Salivarygland5.9
SkeletalMuscle12.25
Skin7
SmoothMuscle7.5
Spinalcord7.3
SubthalamicNucleus7.05
SuperiorCervicalGanglion11
TemporalLobe6.8
Testis5.8
TestisGermCell5.6
TestisIntersitial5.75
TestisLeydigCell7
TestisSeminiferousTubule5.85
Thalamus7.1
Thymus5.2
Thyroid8.5
Tongue7.35
Tonsil6.7
Trachea5.65
TrigeminalGanglion7.45
Uterus5.4
UterusCorpus9.85
WholeBlood7.2
Wholebrain5.75
colon6.85
pineal_day8.04
pineal_night8.02
retina8.3
small_intestine6.6
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P39315
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.22 ± 1.05
Basal Forebrain1.75 ± 0.22
Basal Part of Pons1.52 ± 0.33
Cerebellar Cortex1.73 ± 0.75
Cerebellar Nuclei2.1 ± 0.74
Claustrum2.65 ± 0.79
Epithalamus2.31 ± 0.65
Frontal Lobe1.73 ± 0.65
Globus Pallidus2.71 ± 0.49
Hypothalamus1.83 ± 0.65
Insula1.99 ± 1.04
Limbic Lobe1.81 ± 0.59
Mesencephalon2.1 ± 0.76
Myelencephalon1.92 ± 0.67
Occipital Lobe2 ± 0.77
Parietal Lobe1.85 ± 0.59
Pontine Tegmentum1.91 ± 0.54
Striatum2.01 ± 0.43
Subthalamus1.97 ± 0.76
Temporal Lobe1.73 ± 0.65
Thalamus1.87 ± 0.62
White Matter2.33 ± 0.26
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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