Annotation Detail for ZNF410
Basic Information Top
Gene Symbol: | ZNF410 ( APA-1,APA1 ) |
---|---|
Gene Full Name: | zinc finger protein 410 |
Band: | 14q24.3 |
Quick Links | Entrez ID:57862; OMIM: NA; Uniprot ID:ZN410_HUMAN; ENSEMBL ID: ENSG00000119725; HGNC ID: 20144 |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.270869
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
embryoid body | 3 / 70761 | 42 | |
blastocyst | 2 / 62319 | 32 | |
fetus | 57 / 564012 | 101 | |
neonate | 4 / 31097 | 128 | |
infant | 2 / 23620 | 84 | |
juvenile | 16 / 55556 | 287 | |
adult | 191 / 1939121 | 98 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
adrenal tumor | 1 / 12794 | 78 | |
bladder carcinoma | 2 / 17475 | 114 | |
breast (mammary gland) tumor | 8 / 94178 | 84 | |
cervical tumor | 4 / 34366 | 116 | |
chondrosarcoma | 6 / 82823 | 72 | |
colorectal tumor | 6 / 114246 | 52 | |
esophageal tumor | 1 / 17290 | 57 | |
gastrointestinal tumor | 15 / 119369 | 125 | |
germ cell tumor | 34 / 263845 | 128 | |
glioma | 15 / 106883 | 140 | |
head and neck tumor | 3 / 136302 | 22 | |
kidney tumor | 9 / 68959 | 130 | |
leukemia | 11 / 95842 | 114 | |
liver tumor | 15 / 96359 | 155 | |
lung tumor | 12 / 103127 | 116 | |
lymphoma | 1 / 71755 | 13 | |
non-neoplasia | 14 / 97250 | 143 | |
normal | 439 / 3360307 | 130 | |
ovarian tumor | 3 / 76682 | 39 | |
pancreatic tumor | 4 / 104616 | 38 | |
primitive neuroectodermal tumor of the CNS | 31 / 125680 | 246 | |
prostate cancer | 6 / 102680 | 58 | |
retinoblastoma | 3 / 46356 | 64 | |
skin tumor | 13 / 124949 | 104 | |
soft tissue/muscle tissue tumor | 21 / 125191 | 167 | |
uterine tumor | 17 / 90257 | 188 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
adipose tissue | 0 / 13106 | 0 | |
adrenal gland | 6 / 33197 | 180 | |
ascites | 6 / 40015 | 149 | |
bladder | 8 / 29757 | 268 | |
blood | 31 / 123478 | 251 | |
bone | 2 / 71655 | 27 | |
bone marrow | 4 / 48801 | 81 | |
brain | 164 / 1100989 | 148 | |
cervix | 8 / 48171 | 166 | |
connective tissue | 32 / 149255 | 214 | |
ear | 0 / 16212 | 0 | |
embryonic tissue | 13 / 215722 | 60 | |
esophagus | 2 / 20209 | 98 | |
eye | 14 / 211054 | 66 | |
heart | 8 / 89626 | 89 | |
intestine | 20 / 234472 | 85 | |
kidney | 26 / 211777 | 122 | |
larynx | 0 / 24145 | 0 | |
liver | 24 / 207743 | 115 | |
lung | 42 / 336974 | 124 | |
lymph | 0 / 44270 | 0 | |
lymph node | 8 / 91610 | 87 | |
mammary gland | 21 / 153271 | 137 | |
mouth | 4 / 67052 | 59 | |
muscle | 1 / 107715 | 9 | |
nerve | 0 / 15768 | 0 | |
ovary | 6 / 102051 | 58 | |
pancreas | 11 / 214812 | 51 | |
parathyroid | 1 / 20539 | 48 | |
pharynx | 14 / 41328 | 338 | |
pituitary gland | 0 / 16585 | 0 | |
placenta | 15 / 280825 | 53 | |
prostate | 20 / 189345 | 105 | |
salivary gland | 3 / 20155 | 148 | |
skin | 23 / 210574 | 109 | |
spleen | 22 / 53952 | 407 | |
stomach | 11 / 96619 | 113 | |
testis | 62 / 330442 | 187 | |
thymus | 13 / 81131 | 160 | |
thyroid | 3 / 47473 | 63 | |
tonsil | 2 / 16999 | 117 | |
trachea | 7 / 52413 | 133 | |
umbilical cord | 0 / 13680 | 0 | |
uterus | 56 / 232878 | 240 | |
vascular | 15 / 51780 | 289 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 209944_at
Cell line | Expression level | Expression bar |
---|---|---|
721_B_lymphoblasts | 152.4 | |
Adipocyte | 30.95 | |
AdrenalCortex | 68.5 | |
Adrenalgland | 56.35 | |
Amygdala | 20.45 | |
Appendix | 6.8 | |
AtrioventricularNode | 5.35 | |
BDCA4+_DentriticCells | 81.25 | |
Bonemarrow | 57.1 | |
BronchialEpithelialCells | 123.55 | |
CD105+_Endothelial | 78.05 | |
CD14+_Monocytes | 145.4 | |
CD19+_BCells(neg._sel.) | 163.2 | |
CD33+_Myeloid | 92.95 | |
CD34+ | 161 | |
CD4+_Tcells | 59.55 | |
CD56+_NKCells | 181.75 | |
CD71+_EarlyErythroid | 75.5 | |
CD8+_Tcells | 57.85 | |
CardiacMyocytes | 13.75 | |
Caudatenucleus | 22.15 | |
Cerebellum | 16.95 | |
CerebellumPeduncles | 7.5 | |
CiliaryGanglion | 4.4 | |
CingulateCortex | 27.55 | |
Colorectaladenocarcinoma | 26.25 | |
DorsalRootGanglion | 7 | |
FetalThyroid | 52.7 | |
Fetalbrain | 41.55 | |
Fetalliver | 18.9 | |
Fetallung | 64.4 | |
GlobusPallidus | 4.25 | |
Heart | 7.5 | |
Hypothalamus | 44.1 | |
Kidney | 24.25 | |
Leukemia_chronicMyelogenousK-562 | 63.4 | |
Leukemia_promyelocytic-HL-60 | 35.95 | |
Leukemialymphoblastic(MOLT-4) | 64.2 | |
Liver | 7.15 | |
Lung | 34.95 | |
Lymphnode | 46.4 | |
Lymphoma_burkitts(Daudi) | 40.95 | |
Lymphoma_burkitts(Raji) | 9.45 | |
MedullaOblongata | 22.3 | |
OccipitalLobe | 24.15 | |
OlfactoryBulb | 70.4 | |
Ovary | 18.35 | |
Pancreas | 27.65 | |
PancreaticIslet | 56.55 | |
ParietalLobe | 6.9 | |
Pituitary | 43.85 | |
Placenta | 140.95 | |
Pons | 6.9 | |
PrefrontalCortex | 83.55 | |
Prostate | 42.15 | |
Salivarygland | 22.1 | |
SkeletalMuscle | 6.65 | |
Skin | 15.05 | |
SmoothMuscle | 57.4 | |
Spinalcord | 33.8 | |
SubthalamicNucleus | 4.9 | |
SuperiorCervicalGanglion | 7.1 | |
TemporalLobe | 6.45 | |
Testis | 394.25 | |
TestisGermCell | 233.85 | |
TestisIntersitial | 305.95 | |
TestisLeydigCell | 135.55 | |
TestisSeminiferousTubule | 116.9 | |
Thalamus | 27.8 | |
Thymus | 91.65 | |
Thyroid | 48.85 | |
Tongue | 6.55 | |
Tonsil | 32.15 | |
Trachea | 24.3 | |
TrigeminalGanglion | 21.25 | |
Uterus | 53.55 | |
UterusCorpus | 22.15 | |
WholeBlood | 106.65 | |
Wholebrain | 15.35 | |
colon | 36.75 | |
pineal_day | 69.32 | |
pineal_night | 57.32 | |
retina | 100.45 | |
small_intestine | 76.2 |
Human Whole Brain Microarrayview in Allen Brain Atlas
- Probe name: CUST_6061_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 5.3 ± 0.59 | |
Basal Forebrain | 5.12 ± 0.41 | |
Basal Part of Pons | 5.35 ± 0.17 | |
Cerebellar Cortex | 5.25 ± 0.39 | |
Cerebellar Nuclei | 5.07 ± 0.46 | |
Claustrum | 4.88 ± 0.63 | |
Epithalamus | 5.24 ± 0.41 | |
Frontal Lobe | 5.14 ± 0.37 | |
Globus Pallidus | 5.37 ± 0.27 | |
Hypothalamus | 5.23 ± 0.23 | |
Insula | 5.09 ± 0.21 | |
Limbic Lobe | 5.04 ± 0.4 | |
Mesencephalon | 5.08 ± 0.4 | |
Myelencephalon | 5.09 ± 0.43 | |
Occipital Lobe | 4.98 ± 0.38 | |
Parietal Lobe | 5.09 ± 0.36 | |
Pontine Tegmentum | 5.1 ± 0.4 | |
Striatum | 4.93 ± 0.32 | |
Subthalamus | 4.64 ± 0.54 | |
Temporal Lobe | 5.17 ± 0.43 | |
Thalamus | 5.03 ± 0.44 | |
White Matter | 5.87 ± 0.29 |
Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
---|---|---|---|---|
Zfp410 | CB | Cerebellum | 5.4 | |
5.69 | ||||
Zfp410 | CTX | Cerebral cortex | 26.22 | |
17.52 | ||||
Zfp410 | HIP | Hippocampal region | 27.88 | |
28.07 | ||||
Zfp410 | HPF | Hippocampal formation | 27.38 | |
24.2 | ||||
Zfp410 | HY | Hypothalamus | 17.27 | |
13.39 | ||||
Zfp410 | LSX | Lateral septal complex | 6.12 | |
4.48 | ||||
Zfp410 | MB | Midbrain | 8.72 | |
8.23 | ||||
Zfp410 | MY | Medulla | 8.93 | |
11.58 | ||||
Zfp410 | OLF | Olfactory bulb | 32.48 | |
25.98 | ||||
Zfp410 | P | Pons | 15.67 | |
18.07 | ||||
Zfp410 | PAL | Pallidum | 13.66 | |
11.63 | ||||
Zfp410 | RHP | Retrohippocampal region | 27.04 | |
19.09 | ||||
Zfp410 | sAMY | Striatum-like amygdalar nuclei | 17.49 | |
11.84 | ||||
Zfp410 | STR | Striatum | 9.91 | |
6.93 | ||||
Zfp410 | STRd | Striatum dorsal region | 8.94 | |
6.27 | ||||
Zfp410 | STRv | Striatum ventral region | 12.21 | |
8.37 | ||||
Zfp410 | TH | Thalamus | 19.66 | |
14.37 |