Annotation Detail for PTPRS
Basic Information Top
| Gene Symbol: | PTPRS ( PTPSIGMA ) |
|---|---|
| Gene Full Name: | protein tyrosine phosphatase, receptor type, S |
| Band: | 19p13.3 |
| Quick Links | Entrez ID:5802; OMIM: 601576; Uniprot ID:PTPRS_HUMAN; ENSEMBL ID: ENSG00000105426; HGNC ID: 9681 |
| Relate to Another Database: | SFARIGene; denovo-db |
Unigene EST- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 210823_s_at
| Cell line | Expression level | Expression bar |
|---|---|---|
 | ||
| 721_B_lymphoblasts | 5.85 |  |
| Adipocyte | 4.65 | |
| AdrenalCortex | 5.15 | |
| Adrenalgland | 4 | |
| Amygdala | 5 | |
| Appendix | 4.65 | |
| AtrioventricularNode | 3.65 | |
| BDCA4+_DentriticCells | 24.1 |  |
| Bonemarrow | 4.75 | |
| BronchialEpithelialCells | 4.6 | |
| CD105+_Endothelial | 4.7 | |
| CD14+_Monocytes | 5 | |
| CD19+_BCells(neg._sel.) | 4.95 | |
| CD33+_Myeloid | 6 | |
| CD34+ | 5.95 | |
| CD4+_Tcells | 5.15 | |
| CD56+_NKCells | 5.55 | |
| CD71+_EarlyErythroid | 4.4 | |
| CD8+_Tcells | 4.45 | |
| CardiacMyocytes | 6.15 | |
| Caudatenucleus | 4.2 | |
| Cerebellum | 3.75 | |
| CerebellumPeduncles | 5.35 | |
| CiliaryGanglion | 3.3 | |
| CingulateCortex | 4.8 | |
| Colorectaladenocarcinoma | 4.7 | |
| DorsalRootGanglion | 3.75 | |
| FetalThyroid | 4.5 | |
| Fetalbrain | 4.65 | |
| Fetalliver | 4.05 | |
| Fetallung | 3.75 | |
| GlobusPallidus | 3.85 | |
| Heart | 6.35 | |
| Hypothalamus | 5.1 | |
| Kidney | 3.85 | |
| Leukemia_chronicMyelogenousK-562 | 4.25 | |
| Leukemia_promyelocytic-HL-60 | 4.1 | |
| Leukemialymphoblastic(MOLT-4) | 3.7 | |
| Liver | 6.3 | |
| Lung | 5.1 | |
| Lymphnode | 4 | |
| Lymphoma_burkitts(Daudi) | 6.1 | |
| Lymphoma_burkitts(Raji) | 6.6 | |
| MedullaOblongata | 4.25 | |
| OccipitalLobe | 4.2 | |
| OlfactoryBulb | 3.7 | |
| Ovary | 3.1 | |
| Pancreas | 3.75 | |
| PancreaticIslet | 5 | |
| ParietalLobe | 5.05 | |
| Pituitary | 5.4 | |
| Placenta | 4.8 | |
| Pons | 4.55 | |
| PrefrontalCortex | 5.85 | |
| Prostate | 5.5 | |
| Salivarygland | 3.8 | |
| SkeletalMuscle | 5.5 | |
| Skin | 3.65 | |
| SmoothMuscle | 5.3 | |
| Spinalcord | 4.95 | |
| SubthalamicNucleus | 4.6 | |
| SuperiorCervicalGanglion | 5.35 | |
| TemporalLobe | 4.3 | |
| Testis | 3.95 | |
| TestisGermCell | 3.85 | |
| TestisIntersitial | 3.9 | |
| TestisLeydigCell | 4.6 | |
| TestisSeminiferousTubule | 4 | |
| Thalamus | 4.8 | |
| Thymus | 3.65 | |
| Thyroid | 5.85 | |
| Tongue | 4.65 | |
| Tonsil | 4.55 | |
| Trachea | 3.9 | |
| TrigeminalGanglion | 4.7 | |
| Uterus | 3.8 | |
| UterusCorpus | 4.2 | |
| WholeBlood | 5.1 | |
| Wholebrain | 3.95 | |
| colon | 4.7 | |
| pineal_day | 5.82 | |
| pineal_night | 5.72 | |
| retina | 5.65 | |
| small_intestine | 4.55 | |
- Probe name: A_24_P290856
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.51 ± 0.44 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.23 ± 0.4 | |
| Basal Part of Pons | 7.73 ± 0.36 | |
| Cerebellar Cortex | 6.91 ± 0.27 | |
| Cerebellar Nuclei | 6.67 ± 0.25 | |
| Claustrum | 7.92 ± 0.56 | |
| Epithalamus | 6.44 ± 0.37 | |
| Frontal Lobe | 7.08 ± 0.45 | |
| Globus Pallidus | 7.32 ± 0.55 | |
| Hypothalamus | 6.74 ± 0.33 | |
| Insula | 7.1 ± 0.43 | |
| Limbic Lobe | 7.58 ± 0.46 | |
| Mesencephalon | 7.01 ± 0.45 | |
| Myelencephalon | 7.17 ± 0.44 | |
| Occipital Lobe | 7.55 ± 0.47 | |
| Parietal Lobe | 7.26 ± 0.49 | |
| Pontine Tegmentum | 7.03 ± 0.43 | |
| Striatum | 6.82 ± 0.53 | |
| Subthalamus | 6.64 ± 0.37 | |
| Temporal Lobe | 7.23 ± 0.42 | |
| Thalamus | 7.31 ± 0.39 | |
| White Matter | 7.36 ± 0.63 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ptprs | CB | Cerebellum | 63.57 |  |
| 76.33 | | |||
| Ptprs | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Ptprs | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Ptprs | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Ptprs | HY | Hypothalamus | 99.19 | |
| 96.94 | | |||
| Ptprs | LSX | Lateral septal complex | 100 | |
| 100 | | |||
| Ptprs | MB | Midbrain | 100 | |
| 93.86 | | |||
| Ptprs | MY | Medulla | 100 | |
| 98.21 | | |||
| Ptprs | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Ptprs | P | Pons | 100 | |
| 98.55 | | |||
| Ptprs | PAL | Pallidum | 100 | |
| 100 | | |||
| Ptprs | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Ptprs | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Ptprs | STR | Striatum | 100 | |
| 88.38 | | |||
| Ptprs | STRd | Striatum dorsal region | 100 | |
| 76.69 | | |||
| Ptprs | STRv | Striatum ventral region | 100 | |
| 91.3 | | |||
| Ptprs | TH | Thalamus | 100 | |
| 100 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00039708 | 20 | 1301 | 1320 | CLLNNADLAPHHPKDPVEMR | Peptide Atlas |