Annotation Detail for RAGE
Basic Information Top
| Gene Symbol: | RAGE ( MOK,RAGE1 ) |
|---|---|
| Gene Full Name: | renal tumor antigen |
| Band: | 14q32 |
| Quick Links | Entrez ID:5891; OMIM: 605762; Uniprot ID:MOK_HUMAN; ENSEMBL ID: ENSG00000080823; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.104119
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 22 / 564012 | 39 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 68 / 1939121 | 35 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 3 / 34366 | 87 |  |
| chondrosarcoma | 6 / 82823 | 72 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 10 / 119369 | 83 | |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 26 / 96359 | 269 |  |
| lung tumor | 1 / 103127 | 9 |  |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 8 / 97250 | 82 | |
| normal | 138 / 3360307 | 41 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 5 / 104616 | 47 | |
| primitive neuroectodermal tumor of the CNS | 13 / 125680 | 103 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 23 / 124949 | 184 | |
| soft tissue/muscle tissue tumor | 4 / 125191 | 31 | |
| uterine tumor | 6 / 90257 | 66 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 9 / 71655 | 125 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 43 / 1100989 | 39 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 9 / 149255 | 60 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 7 / 215722 | 32 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 13 / 211054 | 61 | |
| heart | 3 / 89626 | 33 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 1 / 24145 | 41 | |
| liver | 37 / 207743 | 178 | |
| lung | 10 / 336974 | 29 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 4 / 102051 | 39 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 1 / 280825 | 3 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 2 / 20155 | 99 | |
| skin | 31 / 210574 | 147 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 12 / 96619 | 124 | |
| testis | 44 / 330442 | 133 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 9 / 232878 | 38 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 205130_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 5.55 | |
| Adipocyte | 4.95 | |
| AdrenalCortex | 5.05 | |
| Adrenalgland | 4.25 | |
| Amygdala | 5.75 | |
| Appendix | 4.95 | |
| AtrioventricularNode | 3.6 | |
| BDCA4+_DentriticCells | 5.1 | |
| Bonemarrow | 4.85 | |
| BronchialEpithelialCells | 5 | |
| CD105+_Endothelial | 5 | |
| CD14+_Monocytes | 4.95 | |
| CD19+_BCells(neg._sel.) | 5.25 | |
| CD33+_Myeloid | 6 | |
| CD34+ | 6 | |
| CD4+_Tcells | 5.45 | |
| CD56+_NKCells | 6 | |
| CD71+_EarlyErythroid | 4.65 | |
| CD8+_Tcells | 4.7 | |
| CardiacMyocytes | 6.25 | |
| Caudatenucleus | 5.4 | |
| Cerebellum | 4.1 | |
| CerebellumPeduncles | 5.8 | |
| CiliaryGanglion | 3.4 | |
| CingulateCortex | 5.25 | |
| Colorectaladenocarcinoma | 5.05 | |
| DorsalRootGanglion | 3.75 | |
| FetalThyroid | 5.2 | |
| Fetalbrain | 7.4 | |
| Fetalliver | 4.3 | |
| Fetallung | 4.1 | |
| GlobusPallidus | 3.45 | |
| Heart | 7.95 | |
| Hypothalamus | 7.6 | |
| Kidney | 4.05 | |
| Leukemia_chronicMyelogenousK-562 | 4.6 | |
| Leukemia_promyelocytic-HL-60 | 4.9 | |
| Leukemialymphoblastic(MOLT-4) | 4.05 | |
| Liver | 6.7 | |
| Lung | 7.5 | |
| Lymphnode | 4.35 | |
| Lymphoma_burkitts(Daudi) | 6.45 | |
| Lymphoma_burkitts(Raji) | 7 | |
| MedullaOblongata | 4.5 | |
| OccipitalLobe | 5.1 | |
| OlfactoryBulb | 3.95 | |
| Ovary | 3.4 | |
| Pancreas | 3.95 | |
| PancreaticIslet | 5.35 | |
| ParietalLobe | 5.2 | |
| Pituitary | 6.85 | |
| Placenta | 5.1 | |
| Pons | 4.65 | |
| PrefrontalCortex | 6.25 | |
| Prostate | 6.35 | |
| Salivarygland | 4 | |
| SkeletalMuscle | 7.8 | |
| Skin | 3.7 | |
| SmoothMuscle | 8.2 | |
| Spinalcord | 5.4 | |
| SubthalamicNucleus | 4.5 | |
| SuperiorCervicalGanglion | 6.4 | |
| TemporalLobe | 4.55 | |
| Testis | 30.9 | |
| TestisGermCell | 12.5 | |
| TestisIntersitial | 27 | |
| TestisLeydigCell | 12.65 | |
| TestisSeminiferousTubule | 15.5 | |
| Thalamus | 5.1 | |
| Thymus | 3.9 | |
| Thyroid | 14.95 | |
| Tongue | 4.85 | |
| Tonsil | 4.55 | |
| Trachea | 4.2 | |
| TrigeminalGanglion | 4.85 | |
| Uterus | 4.1 | |
| UterusCorpus | 4.55 | |
| WholeBlood | 5.4 | |
| Wholebrain | 4.6 | |
| colon | 5 | |
| pineal_day | 6.26 | |
| pineal_night | 6.22 | |
| retina | 14.55 | |
| small_intestine | 4.7 | |
- Probe name: CUST_16325_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.74 ± 0.62 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.6 ± 0.31 | |
| Basal Part of Pons | 3.24 ± 0.38 | |
| Cerebellar Cortex | 3.28 ± 0.56 | |
| Cerebellar Nuclei | 3.31 ± 0.42 | |
| Claustrum | 3.7 ± 0.93 | |
| Epithalamus | 4.28 ± 0.82 | |
| Frontal Lobe | 3.57 ± 0.62 | |
| Globus Pallidus | 3.46 ± 0.54 | |
| Hypothalamus | 3.5 ± 0.55 | |
| Insula | 3.44 ± 0.79 | |
| Limbic Lobe | 3.85 ± 0.63 | |
| Mesencephalon | 3.69 ± 0.69 | |
| Myelencephalon | 3.63 ± 0.66 | |
| Occipital Lobe | 3.9 ± 0.43 | |
| Parietal Lobe | 3.72 ± 0.58 | |
| Pontine Tegmentum | 3.64 ± 0.57 | |
| Striatum | 3.65 ± 0.7 | |
| Subthalamus | 3.5 ± 0.3 | |
| Temporal Lobe | 3.63 ± 0.55 | |
| Thalamus | 3.43 ± 0.63 | |
| White Matter | 2.41 ± 0.11 | |
Mouse Brain ISH 
Peptide