Annotation Detail for RANBP1


Gene Symbol: | RANBP1 ( HTF9A,MGC88701 ) |
---|---|
Gene Full Name: | RAN binding protein 1 |
Band: | 22q11.21 |
Quick Links | Entrez ID:5902; OMIM: 601180; Uniprot ID:RANG_HUMAN; ENSEMBL ID: ENSG00000099901; HGNC ID: 9847 |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.24763
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
embryoid body | 6 / 70761 | 84 | ![]() |
blastocyst | 5 / 62319 | 80 | ![]() |
fetus | 44 / 564012 | 78 | ![]() |
neonate | 8 / 31097 | 257 | ![]() |
infant | 0 / 23620 | 0 | |
juvenile | 0 / 55556 | 0 | |
adult | 109 / 1939121 | 56 | ![]() |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
adrenal tumor | 1 / 12794 | 78 | ![]() |
bladder carcinoma | 1 / 17475 | 57 | ![]() |
breast (mammary gland) tumor | 3 / 94178 | 31 | ![]() |
cervical tumor | 2 / 34366 | 58 | ![]() |
chondrosarcoma | 4 / 82823 | 48 | ![]() |
colorectal tumor | 10 / 114246 | 87 | ![]() |
esophageal tumor | 0 / 17290 | 0 | |
gastrointestinal tumor | 4 / 119369 | 33 | ![]() |
germ cell tumor | 9 / 263845 | 34 | ![]() |
glioma | 12 / 106883 | 112 | ![]() |
head and neck tumor | 6 / 136302 | 44 | ![]() |
kidney tumor | 3 / 68959 | 43 | ![]() |
leukemia | 4 / 95842 | 41 | ![]() |
liver tumor | 3 / 96359 | 31 | ![]() |
lung tumor | 0 / 103127 | 0 | |
lymphoma | 4 / 71755 | 55 | ![]() |
non-neoplasia | 2 / 97250 | 20 | ![]() |
normal | 195 / 3360307 | 58 | ![]() |
ovarian tumor | 7 / 76682 | 91 | ![]() |
pancreatic tumor | 7 / 104616 | 66 | ![]() |
primitive neuroectodermal tumor of the CNS | 6 / 125680 | 47 | ![]() |
prostate cancer | 8 / 102680 | 77 | ![]() |
retinoblastoma | 3 / 46356 | 64 | ![]() |
skin tumor | 6 / 124949 | 48 | ![]() |
soft tissue/muscle tissue tumor | 7 / 125191 | 55 | ![]() |
uterine tumor | 0 / 90257 | 0 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
adipose tissue | 1 / 13106 | 76 | ![]() |
adrenal gland | 3 / 33197 | 90 | ![]() |
ascites | 4 / 40015 | 99 | ![]() |
bladder | 1 / 29757 | 33 | ![]() |
blood | 2 / 123478 | 16 | ![]() |
bone | 9 / 71655 | 125 | ![]() |
bone marrow | 0 / 48801 | 0 | |
brain | 42 / 1100989 | 38 | ![]() |
cervix | 2 / 48171 | 41 | ![]() |
connective tissue | 2 / 149255 | 13 | ![]() |
ear | 2 / 16212 | 123 | ![]() |
embryonic tissue | 14 / 215722 | 64 | ![]() |
esophagus | 0 / 20209 | 0 | |
eye | 11 / 211054 | 52 | ![]() |
heart | 4 / 89626 | 44 | ![]() |
intestine | 19 / 234472 | 81 | ![]() |
kidney | 6 / 211777 | 28 | ![]() |
larynx | 1 / 24145 | 41 | ![]() |
liver | 17 / 207743 | 81 | ![]() |
lung | 39 / 336974 | 115 | ![]() |
lymph | 0 / 44270 | 0 | |
lymph node | 14 / 91610 | 152 | ![]() |
mammary gland | 7 / 153271 | 45 | ![]() |
mouth | 1 / 67052 | 14 | ![]() |
muscle | 0 / 107715 | 0 | |
nerve | 0 / 15768 | 0 | |
ovary | 8 / 102051 | 78 | ![]() |
pancreas | 18 / 214812 | 83 | ![]() |
parathyroid | 1 / 20539 | 48 | ![]() |
pharynx | 3 / 41328 | 72 | ![]() |
pituitary gland | 0 / 16585 | 0 | |
placenta | 21 / 280825 | 74 | ![]() |
prostate | 12 / 189345 | 63 | ![]() |
salivary gland | 0 / 20155 | 0 | |
skin | 11 / 210574 | 52 | ![]() |
spleen | 0 / 53952 | 0 | |
stomach | 1 / 96619 | 10 | ![]() |
testis | 14 / 330442 | 42 | ![]() |
thymus | 1 / 81131 | 12 | ![]() |
thyroid | 2 / 47473 | 42 | ![]() |
tonsil | 1 / 16999 | 58 | ![]() |
trachea | 0 / 52413 | 0 | |
umbilical cord | 8 / 13680 | 584 | ![]() |
uterus | 8 / 232878 | 34 | ![]() |
vascular | 2 / 51780 | 38 | ![]() |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 202483_s_at
Cell line | Expression level | Expression bar |
---|---|---|
![]() | ||
721_B_lymphoblasts | 1414.25 | ![]() |
Adipocyte | 60.55 | ![]() |
AdrenalCortex | 35.05 | ![]() |
Adrenalgland | 40.1 | ![]() |
Amygdala | 57.2 | ![]() |
Appendix | 24.7 | ![]() |
AtrioventricularNode | 8.55 | ![]() |
BDCA4+_DentriticCells | 202.1 | ![]() |
Bonemarrow | 111.85 | ![]() |
BronchialEpithelialCells | 295.8 | ![]() |
CD105+_Endothelial | 554.85 | ![]() |
CD14+_Monocytes | 88.75 | ![]() |
CD19+_BCells(neg._sel.) | 136.1 | ![]() |
CD33+_Myeloid | 84.7 | ![]() |
CD34+ | 501.25 | ![]() |
CD4+_Tcells | 76.35 | ![]() |
CD56+_NKCells | 141.75 | ![]() |
CD71+_EarlyErythroid | 369.45 | ![]() |
CD8+_Tcells | 55.4 | ![]() |
CardiacMyocytes | 215.45 | ![]() |
Caudatenucleus | 31.75 | ![]() |
Cerebellum | 40.15 | ![]() |
CerebellumPeduncles | 53.3 | ![]() |
CiliaryGanglion | 7.55 | ![]() |
CingulateCortex | 43.3 | ![]() |
Colorectaladenocarcinoma | 289.25 | ![]() |
DorsalRootGanglion | 12.45 | ![]() |
FetalThyroid | 29.35 | ![]() |
Fetalbrain | 55.35 | ![]() |
Fetalliver | 99.15 | ![]() |
Fetallung | 71.05 | ![]() |
GlobusPallidus | 12.75 | ![]() |
Heart | 31.05 | ![]() |
Hypothalamus | 52.1 | ![]() |
Kidney | 27.2 | ![]() |
Leukemia_chronicMyelogenousK-562 | 1553.6 | ![]() |
Leukemia_promyelocytic-HL-60 | 550.35 | ![]() |
Leukemialymphoblastic(MOLT-4) | 398.8 | ![]() |
Liver | 102.7 | ![]() |
Lung | 129.9 | ![]() |
Lymphnode | 39.4 | ![]() |
Lymphoma_burkitts(Daudi) | 838.3 | ![]() |
Lymphoma_burkitts(Raji) | 265.7 | ![]() |
MedullaOblongata | 54.85 | ![]() |
OccipitalLobe | 38.95 | ![]() |
OlfactoryBulb | 40.15 | ![]() |
Ovary | 21.45 | ![]() |
Pancreas | 30.1 | ![]() |
PancreaticIslet | 44.95 | ![]() |
ParietalLobe | 29.7 | ![]() |
Pituitary | 60.45 | ![]() |
Placenta | 95.2 | ![]() |
Pons | 15.95 | ![]() |
PrefrontalCortex | 68.65 | ![]() |
Prostate | 74.5 | ![]() |
Salivarygland | 29.2 | ![]() |
SkeletalMuscle | 28.4 | ![]() |
Skin | 18.75 | ![]() |
SmoothMuscle | 178.95 | ![]() |
Spinalcord | 57.1 | ![]() |
SubthalamicNucleus | 37.75 | ![]() |
SuperiorCervicalGanglion | 8.1 | ![]() |
TemporalLobe | 66.5 | ![]() |
Testis | 239.75 | ![]() |
TestisGermCell | 268.4 | ![]() |
TestisIntersitial | 401.75 | ![]() |
TestisLeydigCell | 193.85 | ![]() |
TestisSeminiferousTubule | 295.4 | ![]() |
Thalamus | 52.75 | ![]() |
Thymus | 230.3 | ![]() |
Thyroid | 67.6 | ![]() |
Tongue | 26.4 | ![]() |
Tonsil | 138.55 | ![]() |
Trachea | 18.15 | ![]() |
TrigeminalGanglion | 5.5 | ![]() |
Uterus | 75.25 | ![]() |
UterusCorpus | 44 | ![]() |
WholeBlood | 34.65 | ![]() |
Wholebrain | 115.5 | ![]() |
colon | 140.35 | ![]() |
pineal_day | 54.72 | ![]() |
pineal_night | 62.44 | ![]() |
retina | 43.7 | ![]() |
small_intestine | 146.2 | ![]() |
- Probe name: A_23_P91590
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 9.98 ± 0.15 | ![]() ![]() ![]() |
Basal Forebrain | 9.72 ± 0.23 | ![]() ![]() ![]() |
Basal Part of Pons | 9.97 ± 0.13 | ![]() ![]() ![]() |
Cerebellar Cortex | 9.99 ± 0.16 | ![]() ![]() ![]() |
Cerebellar Nuclei | 10.04 ± 0.22 | ![]() ![]() ![]() |
Claustrum | 9.88 ± 0.17 | ![]() ![]() ![]() |
Epithalamus | 9.87 ± 0.24 | ![]() ![]() ![]() |
Frontal Lobe | 9.93 ± 0.18 | ![]() ![]() ![]() |
Globus Pallidus | 9.81 ± 0.17 | ![]() ![]() ![]() |
Hypothalamus | 10.05 ± 0.17 | ![]() ![]() ![]() |
Insula | 9.97 ± 0.23 | ![]() ![]() ![]() |
Limbic Lobe | 9.83 ± 0.21 | ![]() ![]() ![]() |
Mesencephalon | 9.89 ± 0.25 | ![]() ![]() ![]() |
Myelencephalon | 9.85 ± 0.25 | ![]() ![]() ![]() |
Occipital Lobe | 9.75 ± 0.23 | ![]() ![]() ![]() |
Parietal Lobe | 9.93 ± 0.22 | ![]() ![]() ![]() |
Pontine Tegmentum | 9.9 ± 0.21 | ![]() ![]() ![]() |
Striatum | 9.4 ± 0.28 | ![]() ![]() ![]() |
Subthalamus | 10.14 ± 0.23 | ![]() ![]() ![]() |
Temporal Lobe | 9.95 ± 0.2 | ![]() ![]() ![]() |
Thalamus | 9.81 ± 0.22 | ![]() ![]() ![]() |
White Matter | 10.05 ± 0.15 | ![]() ![]() ![]() |
Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
---|---|---|---|---|
Ranbp1 | CB | Cerebellum | 37.88 | ![]() |
62.48 | ![]() | |||
Ranbp1 | CTX | Cerebral cortex | 93.37 | ![]() |
79.07 | ![]() | |||
Ranbp1 | HIP | Hippocampal region | 59.64 | ![]() |
99.25 | ![]() | |||
Ranbp1 | HPF | Hippocampal formation | 75.81 | ![]() |
96.32 | ![]() | |||
Ranbp1 | HY | Hypothalamus | 56.33 | ![]() |
52 | ![]() | |||
Ranbp1 | LSX | Lateral septal complex | 56.86 | ![]() |
51.22 | ![]() | |||
Ranbp1 | MB | Midbrain | 77.22 | ![]() |
77.19 | ![]() | |||
Ranbp1 | MY | Medulla | 83.99 | ![]() |
100 | ![]() | |||
Ranbp1 | OLF | Olfactory bulb | 70.69 | ![]() |
63.77 | ![]() | |||
Ranbp1 | P | Pons | 78.52 | ![]() |
93.23 | ![]() | |||
Ranbp1 | PAL | Pallidum | 62.64 | ![]() |
62.88 | ![]() | |||
Ranbp1 | RHP | Retrohippocampal region | 100 | ![]() |
93.89 | ![]() | |||
Ranbp1 | sAMY | Striatum-like amygdalar nuclei | 68.13 | ![]() |
61.11 | ![]() | |||
Ranbp1 | STR | Striatum | 49.68 | ![]() |
39.62 | ![]() | |||
Ranbp1 | STRd | Striatum dorsal region | 47.76 | ![]() |
37.72 | ![]() | |||
Ranbp1 | STRv | Striatum ventral region | 45.21 | ![]() |
33.63 | ![]() | |||
Ranbp1 | TH | Thalamus | 76.38 | ![]() |
69.54 | ![]() |
Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
---|---|---|---|---|---|
PAp00000808 | 23 | 119 | 141 | AWVWNTHADFADECPKPELLAIR | Peptide Atlas |
RANG_HUMAN_0 | 0 | 0 | 0 | FASENDLPEWK | PRIDE |
RANG_HUMAN_0 | 0 | 0 | 0 | TLEEDEEELFK | PRIDE |
RANG_HUMAN_118 | 23 | 118 | 140 | AWVWNTHADFADECPKPELLAIR | PRIDE |
RANG_HUMAN_39 | 11 | 39 | 49 | TLEEDEEELFK | PRIDE |
RANG_HUMAN_57 | 11 | 57 | 67 | FASENDLPEWK | PRIDE |
RANG_HUMAN_57 | 13 | 57 | 69 | FASENDLPEWKER | PRIDE |
RANG_HUMAN_72 | 16 | 72 | 87 | TGDVKLLKHKEKGAIR | PRIDE |
RANG_HUMAN_73 | 15 | 73 | 87 | GDVKLLKHKEKGAIR | PRIDE |
RANG_HUMAN_97 | 21 | 97 | 117 | ICANHYITPMMELKPNAGSDR | PRIDE |