AutismKB 2.0

Annotation Detail for RENBP


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Basic Information Top
Gene Symbol:RENBP ( RBP,RNBP )
Gene Full Name: renin binding protein
Band: Xq28
Quick LinksEntrez ID:5973; OMIM: 312420; Uniprot ID:RENBP_HUMAN; ENSEMBL ID: ENSG00000102032; HGNC ID: 9959
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult25 / 193912112
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma1 / 1068839
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia2 / 9584220
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal30 / 33603078
ovarian tumor0 / 766820 
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor5 / 12494940
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood2 / 12347816
bone0 / 716550 
bone marrow0 / 488010 
brain5 / 11009894
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye4 / 21105418
heart0 / 896260 
intestine1 / 2344724
kidney2 / 2117779
larynx0 / 241450 
liver0 / 2077430 
lung5 / 33697414
lymph0 / 442700 
lymph node1 / 9161010
mammary gland1 / 1532716
mouth0 / 670520 
muscle0 / 1077150 
nerve2 / 15768126
ovary1 / 1020519
pancreas5 / 21481223
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta5 / 28082517
prostate0 / 1893450 
salivary gland0 / 201550 
skin5 / 21057423
spleen2 / 5395237
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 206617_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.5
Adipocyte4.55
AdrenalCortex4.7
Adrenalgland3.85
Amygdala4.85
Appendix4.55
AtrioventricularNode3.45
BDCA4+_DentriticCells5
Bonemarrow4.65
BronchialEpithelialCells4.55
CD105+_Endothelial4.55
CD14+_Monocytes7.25
CD19+_BCells(neg._sel.)4.85
CD33+_Myeloid6
CD34+5.8
CD4+_Tcells4.9
CD56+_NKCells5.45
CD71+_EarlyErythroid4.2
CD8+_Tcells4.35
CardiacMyocytes5.7
Caudatenucleus4.05
Cerebellum3.7
CerebellumPeduncles5.2
CiliaryGanglion3.2
CingulateCortex4.7
Colorectaladenocarcinoma4.6
DorsalRootGanglion3.45
FetalThyroid4.45
Fetalbrain4.7
Fetalliver3.95
Fetallung3.9
GlobusPallidus3.3
Heart6.05
Hypothalamus5.1
Kidney9.25
Leukemia_chronicMyelogenousK-5624.2
Leukemia_promyelocytic-HL-604.05
Leukemialymphoblastic(MOLT-4)3.7
Liver5.95
Lung5.25
Lymphnode5.55
Lymphoma_burkitts(Daudi)5.8
Lymphoma_burkitts(Raji)6.35
MedullaOblongata4.25
OccipitalLobe4.15
OlfactoryBulb3.65
Ovary3.05
Pancreas3.7
PancreaticIslet4.85
ParietalLobe4.8
Pituitary5.35
Placenta4.8
Pons4.35
PrefrontalCortex5.65
Prostate5.4
Salivarygland3.6
SkeletalMuscle7.7
Skin3.5
SmoothMuscle5.2
Spinalcord4.9
SubthalamicNucleus4.15
SuperiorCervicalGanglion5.05
TemporalLobe4.15
Testis3.95
TestisGermCell3.8
TestisIntersitial3.85
TestisLeydigCell4.55
TestisSeminiferousTubule3.95
Thalamus4.65
Thymus3.85
Thyroid5.8
Tongue4.4
Tonsil4.45
Trachea3.85
TrigeminalGanglion5.1
Uterus3.75
UterusCorpus4.05
WholeBlood5.4
Wholebrain3.9
colon4.6
pineal_day5.66
pineal_night5.56
retina5.575
small_intestine4.45
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_10483_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.55 ± 0.93
Basal Forebrain3.38 ± 0.25
Basal Part of Pons3.45 ± 0.96
Cerebellar Cortex2.99 ± 0.83
Cerebellar Nuclei3.33 ± 0.73
Claustrum3.74 ± 0.9
Epithalamus3.55 ± 0.5
Frontal Lobe3.27 ± 0.81
Globus Pallidus4.42 ± 0.32
Hypothalamus3.52 ± 0.46
Insula2.89 ± 0.57
Limbic Lobe3.23 ± 0.95
Mesencephalon3.42 ± 0.78
Myelencephalon3.33 ± 0.86
Occipital Lobe3.28 ± 0.8
Parietal Lobe3.35 ± 1.03
Pontine Tegmentum3.39 ± 0.96
Striatum3.85 ± 0.74
Subthalamus3.35 ± 0.88
Temporal Lobe3.21 ± 0.89
Thalamus3.41 ± 0.71
White Matter4.24 ± 0.35
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
RenbpCBCerebellum0
0
RenbpCTXCerebral cortex0
0
RenbpHIPHippocampal region0
0
RenbpHPFHippocampal formation0
0
RenbpHYHypothalamus0
0
RenbpLSXLateral septal complex0
0
RenbpMBMidbrain0
0
RenbpMYMedulla0
0
RenbpOLFOlfactory bulb0
0
RenbpPPons0
0
RenbpPALPallidum0
0
RenbpRHPRetrohippocampal region0
0
RenbpsAMYStriatum-like amygdalar nuclei0
0
RenbpSTRStriatum0
0
RenbpSTRdStriatum dorsal region0
0
RenbpSTRvStriatum ventral region0
0
RenbpTHThalamus0
0
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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