AutismKB 2.0

Annotation Detail for CDH26


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Basic Information Top
Gene Symbol:CDH26 ( VR20 )
Gene Full Name: cadherin 26
Band: 20q13.33
Quick LinksEntrez ID:60437; OMIM: NA; Uniprot ID:CAD26_HUMAN; ENSEMBL ID: ENSG00000124215; HGNC ID: 15902
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Microarray in BioGPS Top
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_1686_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.41 ± 1.23
Basal Forebrain3.14 ± 0.42
Basal Part of Pons2.92 ± 0.44
Cerebellar Cortex3.14 ± 0.54
Cerebellar Nuclei3.19 ± 0.98
Claustrum3.49 ± 0.78
Epithalamus2.94 ± 0.62
Frontal Lobe3.01 ± 0.7
Globus Pallidus3.8 ± 0.81
Hypothalamus3.26 ± 0.81
Insula2.91 ± 0.89
Limbic Lobe3.09 ± 0.61
Mesencephalon3.27 ± 0.76
Myelencephalon3.13 ± 0.75
Occipital Lobe3.25 ± 0.64
Parietal Lobe3.1 ± 0.8
Pontine Tegmentum3.23 ± 0.78
Striatum3.55 ± 0.72
Subthalamus2.88 ± 0.77
Temporal Lobe2.98 ± 0.64
Thalamus3.19 ± 0.71
White Matter5.06 ± 0.4
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Cdh26CBCerebellum5.22
7.14
Cdh26CTXCerebral cortex7.69
6.09
Cdh26HIPHippocampal region1.63
1.61
Cdh26HPFHippocampal formation2.81
2.51
Cdh26HYHypothalamus0.13
0.13
Cdh26LSXLateral septal complex0.51
0.43
Cdh26MBMidbrain0.19
0.24
Cdh26MYMedulla0.66
1.18
Cdh26OLFOlfactory bulb3.81
3.99
Cdh26PPons0.49
0.79
Cdh26PALPallidum0.17
0.2
Cdh26RHPRetrohippocampal region4.27
3.38
Cdh26sAMYStriatum-like amygdalar nuclei0.68
0.92
Cdh26STRStriatum0.52
0.51
Cdh26STRdStriatum dorsal region0.32
0.31
Cdh26STRvStriatum ventral region0.88
0.69
Cdh26THThalamus0.38
0.46
Peptide Top

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018