AutismKB 2.0

Annotation Detail for BCL7A


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Basic Information Top
Gene Symbol:BCL7A ( BCL7 )
Gene Full Name: B-cell CLL/lymphoma 7A
Band: 12q24.31
Quick LinksEntrez ID:605; OMIM: 601406; Uniprot ID:BCL7A_HUMAN; ENSEMBL ID: ENSG00000110987; HGNC ID: 1004
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst4 / 6231964
fetus28 / 56401249
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult31 / 193912115
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor1 / 3436629
chondrosarcoma1 / 8282312
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor6 / 26384522
glioma5 / 10688346
head and neck tumor3 / 13630222
kidney tumor5 / 6895972
leukemia11 / 95842114
liver tumor0 / 963590 
lung tumor1 / 1031279
lymphoma2 / 7175527
non-neoplasia0 / 972500 
normal91 / 336030727
ovarian tumor1 / 7668213
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor4 / 9025744
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites2 / 4001549
bladder0 / 297570 
blood1 / 1234788
bone1 / 7165513
bone marrow1 / 4880120
brain27 / 110098924
cervix1 / 4817120
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue9 / 21572241
esophagus0 / 202090 
eye10 / 21105447
heart0 / 896260 
intestine2 / 2344728
kidney11 / 21177751
larynx0 / 241450 
liver0 / 2077430 
lung5 / 33697414
lymph1 / 4427022
lymph node15 / 91610163
mammary gland3 / 15327119
mouth1 / 6705214
muscle0 / 1077150 
nerve1 / 1576863
ovary1 / 1020519
pancreas1 / 2148124
parathyroid4 / 20539194
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta1 / 2808253
prostate3 / 18934515
salivary gland0 / 201550 
skin5 / 21057423
spleen0 / 539520 
stomach3 / 9661931
testis1 / 3304423
thymus1 / 8113112
thyroid3 / 4747363
tonsil1 / 1699958
trachea0 / 524130 
umbilical cord0 / 136800 
uterus6 / 23287825
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 203795_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.8
Adipocyte5.5
AdrenalCortex5.85
Adrenalgland4.7
Amygdala6.7
Appendix5.7
AtrioventricularNode4.15
BDCA4+_DentriticCells9.75
Bonemarrow5.45
BronchialEpithelialCells5.5
CD105+_Endothelial5.2
CD14+_Monocytes5.4
CD19+_BCells(neg._sel.)71.1
CD33+_Myeloid6.65
CD34+9.45
CD4+_Tcells6
CD56+_NKCells5.5
CD71+_EarlyErythroid5.8
CD8+_Tcells4.55
CardiacMyocytes7
Caudatenucleus5.85
Cerebellum10.3
CerebellumPeduncles8.05
CiliaryGanglion3.85
CingulateCortex9.45
Colorectaladenocarcinoma5.55
DorsalRootGanglion4.2
FetalThyroid5.5
Fetalbrain13.9
Fetalliver4.85
Fetallung4.6
GlobusPallidus4.05
Heart7
Hypothalamus6
Kidney4.8
Leukemia_chronicMyelogenousK-5625.35
Leukemia_promyelocytic-HL-606.85
Leukemialymphoblastic(MOLT-4)50.95
Liver7.3
Lung6.1
Lymphnode4.7
Lymphoma_burkitts(Daudi)28.1
Lymphoma_burkitts(Raji)24.6
MedullaOblongata7
OccipitalLobe6
OlfactoryBulb4.4
Ovary3.65
Pancreas4.45
PancreaticIslet5.95
ParietalLobe6.5
Pituitary6.45
Placenta5.65
Pons6.75
PrefrontalCortex17.6
Prostate6.45
Salivarygland4.4
SkeletalMuscle6.75
Skin4.3
SmoothMuscle5.55
Spinalcord5.95
SubthalamicNucleus8.05
SuperiorCervicalGanglion6.7
TemporalLobe5.05
Testis4.75
TestisGermCell4.6
TestisIntersitial4.65
TestisLeydigCell5.45
TestisSeminiferousTubule4.75
Thalamus6.2
Thymus8.4
Thyroid7.1
Tongue5.85
Tonsil6.95
Trachea4.65
TrigeminalGanglion5.55
Uterus4.45
UterusCorpus4.9
WholeBlood6.05
Wholebrain8.05
colon5.55
pineal_day6.9
pineal_night6.76
retina6.7
small_intestine5.4
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P61826
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.56 ± 0.5
Basal Forebrain3.88 ± 0.8
Basal Part of Pons4.12 ± 0.47
Cerebellar Cortex4.17 ± 0.6
Cerebellar Nuclei4.33 ± 0.47
Claustrum4.57 ± 0.81
Epithalamus3.47 ± 0.64
Frontal Lobe4.23 ± 0.56
Globus Pallidus4.36 ± 0.62
Hypothalamus3.67 ± 0.49
Insula4.07 ± 0.49
Limbic Lobe4.37 ± 0.67
Mesencephalon4.35 ± 0.58
Myelencephalon4.31 ± 0.71
Occipital Lobe4.36 ± 0.66
Parietal Lobe4.28 ± 0.68
Pontine Tegmentum4.21 ± 0.67
Striatum4.45 ± 0.73
Subthalamus4.22 ± 0.64
Temporal Lobe4.23 ± 0.63
Thalamus4.36 ± 0.7
White Matter3.54 ± 0.34
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Bcl7aCBCerebellum2.37
2.56
Bcl7aCTXCerebral cortex8.93
5.91
Bcl7aHIPHippocampal region11.97
11.92
Bcl7aHPFHippocampal formation9.93
8.79
Bcl7aHYHypothalamus1.12
0.99
Bcl7aLSXLateral septal complex0.13
0.13
Bcl7aMBMidbrain2.39
2.73
Bcl7aMYMedulla0.86
1.26
Bcl7aOLFOlfactory bulb2.77
2.43
Bcl7aPPons5.11
7.41
Bcl7aPALPallidum1.33
1.33
Bcl7aRHPRetrohippocampal region6.59
4.65
Bcl7asAMYStriatum-like amygdalar nuclei1.02
1.05
Bcl7aSTRStriatum1.38
1.23
Bcl7aSTRdStriatum dorsal region1.55
1.33
Bcl7aSTRvStriatum ventral region1.35
1.29
Bcl7aTHThalamus3.91
3.48
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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