AutismKB 2.0

Annotation Detail for RPL10


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Basic Information Top
Gene Symbol:RPL10 ( DKFZp686J1851,DXS648,DXS648E,FLJ23544,FLJ27072,NOV,QM )
Gene Full Name: ribosomal protein L10
Band: Xq28
Quick LinksEntrez ID:6134; OMIM: 312173; Uniprot ID:RL10_HUMAN; ENSEMBL ID: ENSG00000147403; HGNC ID: 10298
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body99 / 707611399
blastocyst124 / 623191989
fetus475 / 564012842
neonate19 / 31097610
infant5 / 23620211
juvenile42 / 55556755
adult1733 / 1939121893
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor27 / 127942110
bladder carcinoma12 / 17475686
breast (mammary gland) tumor129 / 941781369
cervical tumor58 / 343661687
chondrosarcoma59 / 82823712
colorectal tumor174 / 1142461523
esophageal tumor4 / 17290231
gastrointestinal tumor277 / 1193692320
germ cell tumor222 / 263845841
glioma94 / 106883879
head and neck tumor67 / 136302491
kidney tumor62 / 68959899
leukemia102 / 958421064
liver tumor171 / 963591774
lung tumor191 / 1031271852
lymphoma134 / 717551867
non-neoplasia40 / 97250411
normal2869 / 3360307853
ovarian tumor57 / 76682743
pancreatic tumor121 / 1046161156
primitive neuroectodermal tumor of the CNS90 / 125680716
prostate cancer116 / 1026801129
retinoblastoma117 / 463562523
skin tumor227 / 1249491816
soft tissue/muscle tissue tumor135 / 1251911078
uterine tumor75 / 90257830
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue8 / 13106610
adrenal gland43 / 331971295
ascites100 / 400152499
bladder20 / 29757672
blood171 / 1234781384
bone71 / 71655990
bone marrow120 / 488012458
brain607 / 1100989551
cervix59 / 481711224
connective tissue78 / 149255522
ear5 / 16212308
embryonic tissue511 / 2157222368
esophagus4 / 20209197
eye228 / 2110541080
heart101 / 896261126
intestine250 / 2344721066
kidney90 / 211777424
larynx12 / 24145496
liver236 / 2077431136
lung330 / 336974979
lymph112 / 442702529
lymph node57 / 91610622
mammary gland164 / 1532711070
mouth27 / 67052402
muscle166 / 1077151541
nerve10 / 15768634
ovary93 / 102051911
pancreas456 / 2148122122
parathyroid5 / 20539243
pharynx61 / 413281475
pituitary gland10 / 16585602
placenta180 / 280825640
prostate224 / 1893451183
salivary gland15 / 20155744
skin264 / 2105741253
spleen51 / 53952945
stomach220 / 966192276
testis84 / 330442254
thymus25 / 81131308
thyroid38 / 47473800
tonsil68 / 169994000
trachea2 / 5241338
umbilical cord17 / 136801242
uterus158 / 232878678
vascular54 / 517801042
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 200725_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts7395.6
Adipocyte4500.65
AdrenalCortex4791.25
Adrenalgland3513.65
Amygdala958.65
Appendix5603.45
AtrioventricularNode1671.7
BDCA4+_DentriticCells7790.9
Bonemarrow4270.45
BronchialEpithelialCells7251.3
CD105+_Endothelial6863.35
CD14+_Monocytes6975.5
CD19+_BCells(neg._sel.)9603.35
CD33+_Myeloid5797.75
CD34+9876.15
CD4+_Tcells10326.3
CD56+_NKCells8830.6
CD71+_EarlyErythroid2715.4
CD8+_Tcells9574.35
CardiacMyocytes4493.2
Caudatenucleus1495.7
Cerebellum1681.15
CerebellumPeduncles3511.4
CiliaryGanglion1170.65
CingulateCortex906.2
Colorectaladenocarcinoma7591.3
DorsalRootGanglion1797
FetalThyroid5762.1
Fetalbrain4785.3
Fetalliver2815.1
Fetallung5425.05
GlobusPallidus734.15
Heart10770.85
Hypothalamus2235.25
Kidney2385.1
Leukemia_chronicMyelogenousK-5624275.85
Leukemia_promyelocytic-HL-604949.6
Leukemialymphoblastic(MOLT-4)5881.2
Liver5566.85
Lung6892.3
Lymphnode7285.8
Lymphoma_burkitts(Daudi)11909.25
Lymphoma_burkitts(Raji)5082.85
MedullaOblongata1164
OccipitalLobe1188.1
OlfactoryBulb3003.55
Ovary7404.15
Pancreas6271.7
PancreaticIslet5104.4
ParietalLobe1098
Pituitary3056.3
Placenta3636.85
Pons1063.4
PrefrontalCortex1901.05
Prostate5492
Salivarygland3721.2
SkeletalMuscle2659.6
Skin3205.25
SmoothMuscle7960.95
Spinalcord2272.75
SubthalamicNucleus838.65
SuperiorCervicalGanglion1205.05
TemporalLobe1243.35
Testis1289
TestisGermCell1908.9
TestisIntersitial1124.5
TestisLeydigCell1351.95
TestisSeminiferousTubule1290.65
Thalamus1410
Thymus7946.4
Thyroid3881.3
Tongue4140.15
Tonsil5522.35
Trachea3704.65
TrigeminalGanglion1700.45
Uterus3467.65
UterusCorpus7266.85
WholeBlood6831.3
Wholebrain1712.15
colon3019.55
pineal_day3303.8
pineal_night2455.72
retina4880.1
small_intestine3854.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P161166
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.43 ± 0.52
Basal Forebrain6.94 ± 0.21
Basal Part of Pons6.54 ± 0.32
Cerebellar Cortex6.75 ± 0.4
Cerebellar Nuclei6.7 ± 0.18
Claustrum6.1 ± 0.58
Epithalamus6.87 ± 0.33
Frontal Lobe6.52 ± 0.46
Globus Pallidus7.08 ± 0.43
Hypothalamus6.86 ± 0.27
Insula6.7 ± 0.31
Limbic Lobe6.39 ± 0.43
Mesencephalon6.65 ± 0.5
Myelencephalon6.65 ± 0.39
Occipital Lobe6.62 ± 0.35
Parietal Lobe6.46 ± 0.54
Pontine Tegmentum6.61 ± 0.46
Striatum6.88 ± 0.5
Subthalamus6.85 ± 0.41
Temporal Lobe6.55 ± 0.4
Thalamus6.66 ± 0.54
White Matter7.2 ± 0.28
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rpl10CBCerebellum49.89
71.99
Rpl10CTXCerebral cortex100
100
Rpl10HIPHippocampal region100
100
Rpl10HPFHippocampal formation100
100
Rpl10HYHypothalamus100
100
Rpl10LSXLateral septal complex100
100
Rpl10MBMidbrain100
100
Rpl10MYMedulla79.36
100
Rpl10OLFOlfactory bulb100
100
Rpl10PPons86.5
100
Rpl10PALPallidum100
100
Rpl10RHPRetrohippocampal region100
100
Rpl10sAMYStriatum-like amygdalar nuclei100
100
Rpl10STRStriatum100
100
Rpl10STRdStriatum dorsal region98.53
89.21
Rpl10STRvStriatum ventral region100
100
Rpl10THThalamus100
100
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00000487 29 41 69 AKVDEFPLCGHMVSDEYEQLSSEALEAAR Peptide Atlas
RL10_HUMAN_101 15 101 115 MLSCAGADRLQTGMR PRIDE
RL10_HUMAN_116 12 116 127 GAFGKPQGTVAR PRIDE
RL10_HUMAN_128 11 128 138 VHIGQVIMSIR PRIDE
RL10_HUMAN_145 8 145 152 EHVIEALR PRIDE
RL10_HUMAN_145 9 145 153 EHVIEALRR PRIDE
RL10_HUMAN_170 19 170 188 WGFTKFNADEFEDMVAEKR PRIDE
RL10_HUMAN_175 13 175 187 FNADEFEDMVAEK PRIDE
RL10_HUMAN_175 14 175 188 FNADEFEDMVAEKR PRIDE
RL10_HUMAN_40 29 40 68 AKVDEFPLCGHMVSDEYEQLSSEALEAAR PRIDE
RL10_HUMAN_49 20 49 68 GHMVSDEYEQLSSEALEAAR PRIDE
RL10_HUMAN_90 8 90 97 LHPFHVIR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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