AutismKB 2.0

Annotation Detail for RPL12


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Basic Information Top
Gene Symbol:RPL12 ( - )
Gene Full Name: ribosomal protein L12
Band: 9q33.3
Quick LinksEntrez ID:6136; OMIM: 180475; Uniprot ID:RL12_HUMAN; ENSEMBL ID: ENSG00000197958; HGNC ID: 10302
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body57 / 70761805
blastocyst40 / 62319641
fetus129 / 564012228
neonate10 / 31097321
infant7 / 23620296
juvenile4 / 5555671
adult811 / 1939121418
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor8 / 12794625
bladder carcinoma3 / 17475171
breast (mammary gland) tumor82 / 94178870
cervical tumor38 / 343661105
chondrosarcoma22 / 82823265
colorectal tumor53 / 114246463
esophageal tumor2 / 17290115
gastrointestinal tumor78 / 119369653
germ cell tumor76 / 263845288
glioma40 / 106883374
head and neck tumor34 / 136302249
kidney tumor46 / 68959667
leukemia18 / 95842187
liver tumor46 / 96359477
lung tumor82 / 103127795
lymphoma63 / 71755877
non-neoplasia17 / 97250174
normal1083 / 3360307322
ovarian tumor49 / 76682639
pancreatic tumor68 / 104616649
primitive neuroectodermal tumor of the CNS40 / 125680318
prostate cancer187 / 1026801821
retinoblastoma38 / 46356819
skin tumor81 / 124949648
soft tissue/muscle tissue tumor70 / 125191559
uterine tumor46 / 90257509
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue5 / 13106381
adrenal gland9 / 33197271
ascites39 / 40015974
bladder11 / 29757369
blood21 / 123478170
bone67 / 71655935
bone marrow33 / 48801676
brain161 / 1100989146
cervix40 / 48171830
connective tissue29 / 149255194
ear7 / 16212431
embryonic tissue180 / 215722834
esophagus2 / 2020998
eye114 / 211054540
heart32 / 89626357
intestine89 / 234472379
kidney54 / 211777254
larynx9 / 24145372
liver127 / 207743611
lung155 / 336974459
lymph40 / 44270903
lymph node55 / 91610600
mammary gland89 / 153271580
mouth13 / 67052193
muscle61 / 107715566
nerve4 / 15768253
ovary65 / 102051636
pancreas133 / 214812619
parathyroid17 / 20539827
pharynx14 / 41328338
pituitary gland9 / 16585542
placenta57 / 280825202
prostate232 / 1893451225
salivary gland6 / 20155297
skin108 / 210574512
spleen19 / 53952352
stomach36 / 96619372
testis32 / 33044296
thymus9 / 81131110
thyroid12 / 47473252
tonsil23 / 169991353
trachea1 / 5241319
umbilical cord10 / 13680730
uterus83 / 232878356
vascular18 / 51780347
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 200088_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts15544.2
Adipocyte4542
AdrenalCortex4160.85
Adrenalgland2505.7
Amygdala1439.45
Appendix5529.35
AtrioventricularNode1154
BDCA4+_DentriticCells11741.9
Bonemarrow3689.95
BronchialEpithelialCells9399.75
CD105+_Endothelial11468.7
CD14+_Monocytes9046.85
CD19+_BCells(neg._sel.)16606.75
CD33+_Myeloid10006.3
CD34+16150.15
CD4+_Tcells12099.9
CD56+_NKCells11274.95
CD71+_EarlyErythroid3835.9
CD8+_Tcells11438.3
CardiacMyocytes4799.15
Caudatenucleus785.3
Cerebellum793.55
CerebellumPeduncles2086.45
CiliaryGanglion823.25
CingulateCortex739.25
Colorectaladenocarcinoma8848.45
DorsalRootGanglion1444.4
FetalThyroid7149.85
Fetalbrain4806.25
Fetalliver2496.2
Fetallung4865.25
GlobusPallidus464.3
Heart2916.8
Hypothalamus2128.95
Kidney1256.35
Leukemia_chronicMyelogenousK-5628540.25
Leukemia_promyelocytic-HL-609026.55
Leukemialymphoblastic(MOLT-4)5493.4
Liver4386.65
Lung7020
Lymphnode7035.45
Lymphoma_burkitts(Daudi)12744.25
Lymphoma_burkitts(Raji)12238.3
MedullaOblongata792.95
OccipitalLobe1145.25
OlfactoryBulb2402.9
Ovary5387.5
Pancreas6008.25
PancreaticIslet8409.25
ParietalLobe872.2
Pituitary4000.55
Placenta2861.95
Pons701.5
PrefrontalCortex1866.25
Prostate8443.75
Salivarygland4916
SkeletalMuscle2121.5
Skin3547.9
SmoothMuscle7928.9
Spinalcord2352.6
SubthalamicNucleus709.75
SuperiorCervicalGanglion1017.05
TemporalLobe1076.4
Testis1967.35
TestisGermCell3153.1
TestisIntersitial1721.05
TestisLeydigCell2154.7
TestisSeminiferousTubule2018.05
Thalamus1065.65
Thymus6382.9
Thyroid6335.85
Tongue4568.25
Tonsil6391.1
Trachea3448.95
TrigeminalGanglion1328
Uterus5159
UterusCorpus4926.2
WholeBlood6567.95
Wholebrain1424.05
colon4989.65
pineal_day3818.56
pineal_night3320.84
retina4292.025
small_intestine5644
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P375237
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala10.6 ± 0.4
Basal Forebrain10.83 ± 0.18
Basal Part of Pons10.7 ± 0.33
Cerebellar Cortex10.66 ± 0.27
Cerebellar Nuclei10.51 ± 0.52
Claustrum10.3 ± 0.54
Epithalamus10.52 ± 0.46
Frontal Lobe10.45 ± 0.5
Globus Pallidus11.27 ± 0.2
Hypothalamus10.66 ± 0.52
Insula10.59 ± 0.29
Limbic Lobe10.3 ± 0.42
Mesencephalon10.4 ± 0.49
Myelencephalon10.41 ± 0.45
Occipital Lobe10.02 ± 0.4
Parietal Lobe10.32 ± 0.36
Pontine Tegmentum10.42 ± 0.36
Striatum10.49 ± 0.39
Subthalamus10.37 ± 0.41
Temporal Lobe10.45 ± 0.35
Thalamus10.35 ± 0.33
White Matter11.05 ± 0.44
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00001407 15 17 31 CTGGEVGATSALAPK Peptide Atlas
RL12_HUMAN_0 0 0 0 IGPLGLSPK PRIDE
RL12_HUMAN_0 0 0 0 QAQIEVVPSASALIIK PRIDE
RL12_HUMAN_100 15 100 114 HSGNITFDEIVNIAR PRIDE
RL12_HUMAN_123 23 123 145 ELSGTIKEILGTAQSVGCNVDGR PRIDE
RL12_HUMAN_125 22 125 146 LSGTIKEILGTAQSVGCNVDGR PRIDE
RL12_HUMAN_130 16 130 145 EILGTAQSVGCNVDGR PRIDE
RL12_HUMAN_131 16 131 146 EILGTAQSVGCNVDGR PRIDE
RL12_HUMAN_146 19 146 164 HPHDIIDDINSGAVECPAS PRIDE
RL12_HUMAN_148 18 148 165 PHDIIDDINSGAVECPAS PRIDE
RL12_HUMAN_16 15 16 30 CTGGEVGATSALAPK PRIDE
RL12_HUMAN_17 15 17 31 CTGGEVGATSALAPK PRIDE
RL12_HUMAN_31 9 31 39 IGPLGLSPK PRIDE
RL12_HUMAN_32 9 32 40 IGPLGLSPK PRIDE
RL12_HUMAN_67 16 67 82 QAQIEVVPSASALIIK PRIDE
RL12_HUMAN_68 23 68 90 QAQIEVVPSASALIIKALKEPPR PRIDE
RL12_HUMAN_7 10 7 16 PNEIKVVYLR PRIDE
RL12_HUMAN_96 18 96 113 NIKHSGNITFDEIVNIAR PRIDE
RL12_HUMAN_99 15 99 113 HSGNITFDEIVNIAR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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