AutismKB 2.0

Annotation Detail for RPL31


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Basic Information Top
Gene Symbol:RPL31 ( MGC88191 )
Gene Full Name: ribosomal protein L31
Band: 2q11.2
Quick LinksEntrez ID:6160; OMIM: NA; Uniprot ID:RL31_HUMAN; ENSEMBL ID: ENSG00000071082; HGNC ID: 10334
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body41 / 70761579
blastocyst88 / 623191412
fetus224 / 564012397
neonate53 / 310971704
infant8 / 23620338
juvenile8 / 55556143
adult955 / 1939121492
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor12 / 12794937
bladder carcinoma14 / 17475801
breast (mammary gland) tumor49 / 94178520
cervical tumor18 / 34366523
chondrosarcoma16 / 82823193
colorectal tumor49 / 114246428
esophageal tumor3 / 17290173
gastrointestinal tumor41 / 119369343
germ cell tumor90 / 263845341
glioma42 / 106883392
head and neck tumor30 / 136302220
kidney tumor35 / 68959507
leukemia39 / 95842406
liver tumor65 / 96359674
lung tumor54 / 103127523
lymphoma17 / 71755236
non-neoplasia5 / 9725051
normal1800 / 3360307535
ovarian tumor29 / 76682378
pancreatic tumor28 / 104616267
primitive neuroectodermal tumor of the CNS38 / 125680302
prostate cancer198 / 1026801928
retinoblastoma14 / 46356302
skin tumor43 / 124949344
soft tissue/muscle tissue tumor87 / 125191694
uterine tumor27 / 90257299
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue6 / 13106457
adrenal gland17 / 33197512
ascites15 / 40015374
bladder19 / 29757638
blood49 / 123478396
bone65 / 71655907
bone marrow118 / 488012417
brain222 / 1100989201
cervix18 / 48171373
connective tissue25 / 149255167
ear17 / 162121048
embryonic tissue313 / 2157221450
esophagus3 / 20209148
eye84 / 211054398
heart96 / 896261071
intestine79 / 234472336
kidney53 / 211777250
larynx2 / 2414582
liver171 / 207743823
lung113 / 336974335
lymph8 / 44270180
lymph node28 / 91610305
mammary gland58 / 153271378
mouth10 / 67052149
muscle168 / 1077151559
nerve2 / 15768126
ovary49 / 102051480
pancreas66 / 214812307
parathyroid23 / 205391119
pharynx17 / 41328411
pituitary gland26 / 165851567
placenta56 / 280825199
prostate297 / 1893451568
salivary gland19 / 20155942
skin61 / 210574289
spleen10 / 53952185
stomach36 / 96619372
testis79 / 330442239
thymus12 / 81131147
thyroid30 / 47473631
tonsil21 / 169991235
trachea2 / 5241338
umbilical cord53 / 136803874
uterus81 / 232878347
vascular69 / 517801332
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 221592_at
Cell line Expression level Expression bar
721_B_lymphoblasts3.85
Adipocyte3.05
AdrenalCortex3.1
Adrenalgland2.55
Amygdala3.25
Appendix3
AtrioventricularNode2.35
BDCA4+_DentriticCells3.4
Bonemarrow3
BronchialEpithelialCells3.05
CD105+_Endothelial3.1
CD14+_Monocytes3.3
CD19+_BCells(neg._sel.)3.3
CD33+_Myeloid3.95
CD34+3.9
CD4+_Tcells3.4
CD56+_NKCells4.15
CD71+_EarlyErythroid2.85
CD8+_Tcells3
CardiacMyocytes3.85
Caudatenucleus2.75
Cerebellum2.45
CerebellumPeduncles3.45
CiliaryGanglion2.1
CingulateCortex3.1
Colorectaladenocarcinoma3.05
DorsalRootGanglion2.35
FetalThyroid2.95
Fetalbrain3.05
Fetalliver2.6
Fetallung2.55
GlobusPallidus2.2
Heart3.85
Hypothalamus3.35
Kidney2.4
Leukemia_chronicMyelogenousK-5622.75
Leukemia_promyelocytic-HL-602.7
Leukemialymphoblastic(MOLT-4)2.45
Liver3.95
Lung3.4
Lymphnode2.6
Lymphoma_burkitts(Daudi)3.85
Lymphoma_burkitts(Raji)4.2
MedullaOblongata2.8
OccipitalLobe2.75
OlfactoryBulb2.4
Ovary2.05
Pancreas2.4
PancreaticIslet3.25
ParietalLobe3.2
Pituitary3.55
Placenta3.15
Pons2.9
PrefrontalCortex3.8
Prostate3.6
Salivarygland2.4
SkeletalMuscle3.45
Skin2.3
SmoothMuscle3.5
Spinalcord3.25
SubthalamicNucleus2.75
SuperiorCervicalGanglion3.35
TemporalLobe2.8
Testis2.75
TestisGermCell2.6
TestisIntersitial2.55
TestisLeydigCell3
TestisSeminiferousTubule2.6
Thalamus3.1
Thymus2.45
Thyroid3.9
Tongue2.95
Tonsil2.95
Trachea2.55
TrigeminalGanglion2.95
Uterus2.5
UterusCorpus2.75
WholeBlood3.4
Wholebrain2.65
colon3.05
pineal_day3.86
pineal_night3.76
retina3.725
small_intestine3
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P213783
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala14.57 ± 0.27
Basal Forebrain14.49 ± 0.06
Basal Part of Pons14.3 ± 0.34
Cerebellar Cortex13.92 ± 0.14
Cerebellar Nuclei14.11 ± 0.42
Claustrum14.45 ± 0.23
Epithalamus14.07 ± 0.41
Frontal Lobe14.25 ± 0.36
Globus Pallidus15.13 ± 0.32
Hypothalamus14.4 ± 0.3
Insula14.4 ± 0.28
Limbic Lobe14.1 ± 0.49
Mesencephalon14.24 ± 0.47
Myelencephalon14.22 ± 0.41
Occipital Lobe13.86 ± 0.47
Parietal Lobe14.28 ± 0.35
Pontine Tegmentum14.32 ± 0.33
Striatum14.58 ± 0.35
Subthalamus14.34 ± 0.16
Temporal Lobe14.29 ± 0.33
Thalamus14.23 ± 0.31
White Matter14.59 ± 0.35
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rpl31CBCerebellum25.56
28.33
Rpl31CTXCerebral cortex73.61
65.57
Rpl31HIPHippocampal region84.72
100
Rpl31HPFHippocampal formation87.28
100
Rpl31HYHypothalamus58.96
59.87
Rpl31LSXLateral septal complex30.2
26.86
Rpl31MBMidbrain54.59
58.11
Rpl31MYMedulla46.2
56.54
Rpl31OLFOlfactory bulb65.49
61.49
Rpl31PPons46.96
56.25
Rpl31PALPallidum49.8
52.21
Rpl31RHPRetrohippocampal region91.64
91.52
Rpl31sAMYStriatum-like amygdalar nuclei92.06
83.86
Rpl31STRStriatum72.29
62.45
Rpl31STRdStriatum dorsal region74.18
64.2
Rpl31STRvStriatum ventral region69.54
56.69
Rpl31THThalamus38.24
37.76
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00070354 7 33 39 IHGVGFK Peptide Atlas
RL31_HUMAN_101 14 101 114 LYTLVTYVPVTTFK PRIDE
RL31_HUMAN_102 14 102 115 LYTLVTYVPVTTFK PRIDE
RL31_HUMAN_115 10 115 124 NLQTVNVDEN PRIDE
RL31_HUMAN_14 9 14 22 SAINEVVTR PRIDE
RL31_HUMAN_15 9 15 23 SAINEVVTR PRIDE
RL31_HUMAN_16 8 16 23 AINEVVTR PRIDE
RL31_HUMAN_2 13 2 14 APAKKGGEKKKGR PRIDE
RL31_HUMAN_3 12 3 14 PAKKGGEKKKGR PRIDE
RL31_HUMAN_4 11 4 14 AKKGGEKKKGR PRIDE
RL31_HUMAN_56 8 56 63 EMGTPDVR PRIDE
RL31_HUMAN_91 24 91 114 RNEDEDSPNKLYTLVTYVPVTTFK PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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