AutismKB 2.0

Annotation Detail for RPL34


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Basic Information Top
Gene Symbol:RPL34 ( MGC111005 )
Gene Full Name: ribosomal protein L34
Band: 4q25
Quick LinksEntrez ID:6164; OMIM: NA; Uniprot ID:RL34_HUMAN; ENSEMBL ID: ENSG00000109475; HGNC ID: 10340
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body25 / 70761353
blastocyst186 / 623192984
fetus86 / 564012152
neonate15 / 31097482
infant3 / 23620127
juvenile1 / 5555617
adult389 / 1939121200
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma3 / 17475171
breast (mammary gland) tumor14 / 94178148
cervical tumor7 / 34366203
chondrosarcoma10 / 82823120
colorectal tumor16 / 114246140
esophageal tumor1 / 1729057
gastrointestinal tumor16 / 119369134
germ cell tumor24 / 26384590
glioma16 / 106883149
head and neck tumor9 / 13630266
kidney tumor13 / 68959188
leukemia36 / 95842375
liver tumor6 / 9635962
lung tumor16 / 103127155
lymphoma10 / 71755139
non-neoplasia3 / 9725030
normal1069 / 3360307318
ovarian tumor16 / 76682208
pancreatic tumor26 / 104616248
primitive neuroectodermal tumor of the CNS24 / 125680190
prostate cancer99 / 102680964
retinoblastoma13 / 46356280
skin tumor20 / 124949160
soft tissue/muscle tissue tumor47 / 125191375
uterine tumor19 / 90257210
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue5 / 13106381
adrenal gland3 / 3319790
ascites5 / 40015124
bladder2 / 2975767
blood65 / 123478526
bone14 / 71655195
bone marrow28 / 48801573
brain79 / 110098971
cervix7 / 48171145
connective tissue13 / 14925587
ear3 / 16212185
embryonic tissue422 / 2157221956
esophagus1 / 2020949
eye46 / 211054217
heart24 / 89626267
intestine26 / 234472110
kidney26 / 211777122
larynx2 / 2414582
liver47 / 207743226
lung53 / 336974157
lymph4 / 4427090
lymph node12 / 91610130
mammary gland18 / 153271117
mouth5 / 6705274
muscle62 / 107715575
nerve1 / 1576863
ovary28 / 102051274
pancreas42 / 214812195
parathyroid0 / 205390 
pharynx9 / 41328217
pituitary gland10 / 16585602
placenta31 / 280825110
prostate147 / 189345776
salivary gland0 / 201550 
skin29 / 210574137
spleen5 / 5395292
stomach16 / 96619165
testis19 / 33044257
thymus5 / 8113161
thyroid8 / 47473168
tonsil35 / 169992058
trachea2 / 5241338
umbilical cord15 / 136801096
uterus44 / 232878188
vascular43 / 51780830
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 200026_at
Cell line Expression level Expression bar
721_B_lymphoblasts9689.85
Adipocyte6086.55
AdrenalCortex5246.3
Adrenalgland3290.45
Amygdala3200.7
Appendix5829.95
AtrioventricularNode2057.65
BDCA4+_DentriticCells11551.8
Bonemarrow3282.95
BronchialEpithelialCells10555.35
CD105+_Endothelial9112.8
CD14+_Monocytes12948.05
CD19+_BCells(neg._sel.)15759.55
CD33+_Myeloid10970.15
CD34+14793.85
CD4+_Tcells16901.75
CD56+_NKCells12095.1
CD71+_EarlyErythroid4878
CD8+_Tcells14576.35
CardiacMyocytes5530.65
Caudatenucleus2749.55
Cerebellum2540.4
CerebellumPeduncles5770.95
CiliaryGanglion1915.7
CingulateCortex2925.05
Colorectaladenocarcinoma3198.05
DorsalRootGanglion1860.25
FetalThyroid6671.5
Fetalbrain6254.7
Fetalliver2940.4
Fetallung5088.25
GlobusPallidus2061.75
Heart1063.05
Hypothalamus5092.8
Kidney1793.2
Leukemia_chronicMyelogenousK-5626840
Leukemia_promyelocytic-HL-607399.65
Leukemialymphoblastic(MOLT-4)7378.1
Liver1039.5
Lung3330.1
Lymphnode7452.1
Lymphoma_burkitts(Daudi)10025.4
Lymphoma_burkitts(Raji)7082.4
MedullaOblongata2851.95
OccipitalLobe3092.15
OlfactoryBulb4186.8
Ovary6189.95
Pancreas5336.1
PancreaticIslet7522.9
ParietalLobe2332.55
Pituitary7539.55
Placenta3539.9
Pons2589.1
PrefrontalCortex5212.25
Prostate5273.7
Salivarygland6521.05
SkeletalMuscle2094.45
Skin3887.65
SmoothMuscle9207.45
Spinalcord4740.55
SubthalamicNucleus3247.4
SuperiorCervicalGanglion1828.15
TemporalLobe3857.2
Testis1453.65
TestisGermCell4832.65
TestisIntersitial3903.2
TestisLeydigCell3369.35
TestisSeminiferousTubule3470.6
Thalamus4130.7
Thymus4439.4
Thyroid6827.55
Tongue5023.75
Tonsil6375.5
Trachea4286.6
TrigeminalGanglion2284.6
Uterus7732.9
UterusCorpus6363.6
WholeBlood11181
Wholebrain4258.5
colon4912.55
pineal_day5491.88
pineal_night5018.16
retina6011.3
small_intestine5178.95
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P220127
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala11.01 ± 0.33
Basal Forebrain11.06 ± 0.1
Basal Part of Pons10.89 ± 0.27
Cerebellar Cortex10.81 ± 0.24
Cerebellar Nuclei10.94 ± 0.49
Claustrum10.86 ± 0.33
Epithalamus10.73 ± 0.4
Frontal Lobe10.74 ± 0.33
Globus Pallidus11.85 ± 0.2
Hypothalamus11.02 ± 0.34
Insula10.76 ± 0.36
Limbic Lobe10.58 ± 0.34
Mesencephalon10.92 ± 0.41
Myelencephalon10.79 ± 0.37
Occipital Lobe10.6 ± 0.31
Parietal Lobe10.8 ± 0.34
Pontine Tegmentum10.89 ± 0.34
Striatum11.09 ± 0.36
Subthalamus10.94 ± 0.07
Temporal Lobe10.75 ± 0.32
Thalamus10.98 ± 0.26
White Matter11.46 ± 0.63
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00000813 9 77 85 AYGGSMCAK Peptide Atlas
RL34_HUMAN_10 9 10 18 LSYNTASNK PRIDE
RL34_HUMAN_93 8 93 100 AFLIEEQK PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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