AutismKB 2.0

Annotation Detail for RPL37A


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Basic Information Top
Gene Symbol:RPL37A ( MGC74786 )
Gene Full Name: ribosomal protein L37a
Band: 2q35
Quick LinksEntrez ID:6168; OMIM: 613314; Uniprot ID:RL37A_HUMAN; ENSEMBL ID: ENSG00000197756; HGNC ID: 10348
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body34 / 70761480
blastocyst177 / 623192840
fetus213 / 564012377
neonate16 / 31097514
infant8 / 23620338
juvenile15 / 55556269
adult1396 / 1939121719
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor7 / 12794547
bladder carcinoma5 / 17475286
breast (mammary gland) tumor55 / 94178584
cervical tumor17 / 34366494
chondrosarcoma11 / 82823132
colorectal tumor47 / 114246411
esophageal tumor4 / 17290231
gastrointestinal tumor23 / 119369192
germ cell tumor58 / 263845219
glioma78 / 106883729
head and neck tumor36 / 136302264
kidney tumor36 / 68959522
leukemia32 / 95842333
liver tumor30 / 96359311
lung tumor41 / 103127397
lymphoma26 / 71755362
non-neoplasia7 / 9725071
normal1719 / 3360307511
ovarian tumor34 / 76682443
pancreatic tumor70 / 104616669
primitive neuroectodermal tumor of the CNS57 / 125680453
prostate cancer453 / 1026804411
retinoblastoma27 / 46356582
skin tumor82 / 124949656
soft tissue/muscle tissue tumor85 / 125191678
uterine tumor23 / 90257254
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue8 / 13106610
adrenal gland19 / 33197572
ascites5 / 40015124
bladder7 / 29757235
blood66 / 123478534
bone66 / 71655921
bone marrow50 / 488011024
brain188 / 1100989170
cervix19 / 48171394
connective tissue19 / 149255127
ear17 / 162121048
embryonic tissue329 / 2157221525
esophagus4 / 20209197
eye75 / 211054355
heart52 / 89626580
intestine78 / 234472332
kidney51 / 211777240
larynx1 / 2414541
liver102 / 207743490
lung78 / 336974231
lymph23 / 44270519
lymph node14 / 91610152
mammary gland66 / 153271430
mouth15 / 67052223
muscle497 / 1077154614
nerve1 / 1576863
ovary47 / 102051460
pancreas91 / 214812423
parathyroid13 / 20539632
pharynx21 / 41328508
pituitary gland26 / 165851567
placenta39 / 280825138
prostate562 / 1893452968
salivary gland6 / 20155297
skin103 / 210574489
spleen9 / 53952166
stomach23 / 96619238
testis30 / 33044290
thymus1 / 8113112
thyroid20 / 47473421
tonsil32 / 169991882
trachea0 / 524130 
umbilical cord42 / 136803070
uterus52 / 232878223
vascular32 / 51780617
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 201429_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts18563.55
Adipocyte13989.05
AdrenalCortex12628.65
Adrenalgland11881.7
Amygdala9487.45
Appendix12684.55
AtrioventricularNode5085.65
BDCA4+_DentriticCells17427.45
Bonemarrow10377.8
BronchialEpithelialCells14725.65
CD105+_Endothelial18297.5
CD14+_Monocytes16172.05
CD19+_BCells(neg._sel.)17193.3
CD33+_Myeloid20970.6
CD34+22746.35
CD4+_Tcells16265
CD56+_NKCells21019.05
CD71+_EarlyErythroid10330.95
CD8+_Tcells16245.9
CardiacMyocytes16864.1
Caudatenucleus12720.45
Cerebellum12364
CerebellumPeduncles16552.25
CiliaryGanglion4663.7
CingulateCortex9548.5
Colorectaladenocarcinoma9989.35
DorsalRootGanglion6506.6
FetalThyroid14079.25
Fetalbrain19793.65
Fetalliver8400.5
Fetallung13362
GlobusPallidus7197.7
Heart16321.3
Hypothalamus13952.15
Kidney8861.25
Leukemia_chronicMyelogenousK-56216065.45
Leukemia_promyelocytic-HL-6013115.3
Leukemialymphoblastic(MOLT-4)12838.2
Liver10622.85
Lung17636.35
Lymphnode13670.15
Lymphoma_burkitts(Daudi)19269.65
Lymphoma_burkitts(Raji)17551
MedullaOblongata10225.85
OccipitalLobe8489.4
OlfactoryBulb11047.95
Ovary11330.6
Pancreas10560.3
PancreaticIslet15316.85
ParietalLobe9671.95
Pituitary14971.9
Placenta9291.8
Pons8938.6
PrefrontalCortex18461.85
Prostate17967.6
Salivarygland11251.4
SkeletalMuscle14784.9
Skin10213.35
SmoothMuscle21659.6
Spinalcord12128.4
SubthalamicNucleus9710.45
SuperiorCervicalGanglion6229.5
TemporalLobe11849.2
Testis19222.35
TestisGermCell14352.15
TestisIntersitial12685.05
TestisLeydigCell12192.15
TestisSeminiferousTubule13100.4
Thalamus11120.85
Thymus15587.05
Thyroid15362.3
Tongue13760.4
Tonsil11249.5
Trachea9202.75
TrigeminalGanglion8409.25
Uterus12179.05
UterusCorpus14870.7
WholeBlood18301.4
Wholebrain14015.9
colon9945.1
pineal_day14880.08
pineal_night13056.8
retina16821.525
small_intestine9012.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P142724
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala13.79 ± 0.27
Basal Forebrain14.04 ± 0.07
Basal Part of Pons13.58 ± 0.27
Cerebellar Cortex13.74 ± 0.23
Cerebellar Nuclei13.69 ± 0.42
Claustrum13.36 ± 0.56
Epithalamus13.48 ± 0.36
Frontal Lobe13.62 ± 0.35
Globus Pallidus14.72 ± 0.21
Hypothalamus13.92 ± 0.3
Insula13.75 ± 0.29
Limbic Lobe13.42 ± 0.4
Mesencephalon13.78 ± 0.48
Myelencephalon13.63 ± 0.37
Occipital Lobe13.28 ± 0.41
Parietal Lobe13.62 ± 0.36
Pontine Tegmentum13.75 ± 0.34
Striatum13.76 ± 0.38
Subthalamus13.81 ± 0.18
Temporal Lobe13.73 ± 0.33
Thalamus13.66 ± 0.32
White Matter14.63 ± 0.47
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rpl37aCBCerebellum15.05
17.32
Rpl37aCTXCerebral cortex53.78
40.85
Rpl37aHIPHippocampal region43.69
64.73
Rpl37aHPFHippocampal formation44.6
53.38
Rpl37aHYHypothalamus52.46
48.2
Rpl37aLSXLateral septal complex25.88
18.55
Rpl37aMBMidbrain34.81
35
Rpl37aMYMedulla37.78
45.2
Rpl37aOLFOlfactory bulb43
32.94
Rpl37aPPons38.21
43.98
Rpl37aPALPallidum33.83
34.07
Rpl37aRHPRetrohippocampal region46.95
37.19
Rpl37asAMYStriatum-like amygdalar nuclei47.56
37.74
Rpl37aSTRStriatum24.17
18.71
Rpl37aSTRdStriatum dorsal region20.11
16.06
Rpl37aSTRvStriatum ventral region24.54
17.12
Rpl37aTHThalamus21.56
18.72
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00012120 8 37 44 YTCSFCGK Peptide Atlas
RL37A_HUMAN_27 9 27 35 KIEISQHAK PRIDE
RL37A_HUMAN_49 13 49 61 RAVGIWHCGSCMK PRIDE
RL37A_HUMAN_50 12 50 61 AVGIWHCGSCMK PRIDE
RL37A_HUMAN_62 18 62 79 TVAGGAWTYNTTSAVTVK PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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