AutismKB 2.0

Annotation Detail for RPS12


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Basic Information Top
Gene Symbol:RPS12 ( - )
Gene Full Name: ribosomal protein S12
Band: 6q23.2
Quick LinksEntrez ID:6206; OMIM: 603660; Uniprot ID:RS12_HUMAN; ENSEMBL ID: ENSG00000112306; HGNC ID: 10385
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body24 / 70761339
blastocyst110 / 623191765
fetus73 / 564012129
neonate23 / 31097739
infant4 / 23620169
juvenile9 / 55556161
adult343 / 1939121176
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma1 / 1747557
breast (mammary gland) tumor17 / 94178180
cervical tumor10 / 34366290
chondrosarcoma3 / 8282336
colorectal tumor33 / 114246288
esophageal tumor2 / 17290115
gastrointestinal tumor34 / 119369284
germ cell tumor31 / 263845117
glioma13 / 106883121
head and neck tumor12 / 13630288
kidney tumor13 / 68959188
leukemia8 / 9584283
liver tumor86 / 96359892
lung tumor22 / 103127213
lymphoma9 / 71755125
non-neoplasia6 / 9725061
normal774 / 3360307230
ovarian tumor9 / 76682117
pancreatic tumor23 / 104616219
primitive neuroectodermal tumor of the CNS22 / 125680175
prostate cancer107 / 1026801042
retinoblastoma5 / 46356107
skin tumor40 / 124949320
soft tissue/muscle tissue tumor36 / 125191287
uterine tumor13 / 90257144
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue3 / 13106228
adrenal gland6 / 33197180
ascites15 / 40015374
bladder2 / 2975767
blood17 / 123478137
bone26 / 71655362
bone marrow23 / 48801471
brain116 / 1100989105
cervix11 / 48171228
connective tissue9 / 14925560
ear5 / 16212308
embryonic tissue312 / 2157221446
esophagus3 / 20209148
eye35 / 211054165
heart45 / 89626502
intestine53 / 234472226
kidney20 / 21177794
larynx3 / 24145124
liver113 / 207743543
lung37 / 336974109
lymph9 / 44270203
lymph node10 / 91610109
mammary gland22 / 153271143
mouth5 / 6705274
muscle39 / 107715362
nerve3 / 15768190
ovary17 / 102051166
pancreas42 / 214812195
parathyroid0 / 205390 
pharynx5 / 41328120
pituitary gland6 / 16585361
placenta20 / 28082571
prostate118 / 189345623
salivary gland5 / 20155248
skin58 / 210574275
spleen19 / 53952352
stomach17 / 96619175
testis20 / 33044260
thymus16 / 81131197
thyroid9 / 47473189
tonsil17 / 169991000
trachea3 / 5241357
umbilical cord23 / 136801681
uterus42 / 232878180
vascular12 / 51780231
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 213377_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts7968.6
Adipocyte6579.3
AdrenalCortex3029.1
Adrenalgland2472.05
Amygdala1703.75
Appendix4990.7
AtrioventricularNode1395.65
BDCA4+_DentriticCells10439.4
Bonemarrow4806.3
BronchialEpithelialCells9719.7
CD105+_Endothelial9298.45
CD14+_Monocytes7041.05
CD19+_BCells(neg._sel.)12067.65
CD33+_Myeloid7327.2
CD34+13746
CD4+_Tcells12331.2
CD56+_NKCells9681.1
CD71+_EarlyErythroid7223.35
CD8+_Tcells12487
CardiacMyocytes7426.7
Caudatenucleus2145.4
Cerebellum873.85
CerebellumPeduncles2714.8
CiliaryGanglion1025.85
CingulateCortex1618
Colorectaladenocarcinoma1993.85
DorsalRootGanglion1496.6
FetalThyroid6374.5
Fetalbrain4598.95
Fetalliver3633.45
Fetallung6021.45
GlobusPallidus768.7
Heart1628.4
Hypothalamus4268.35
Kidney1860.45
Leukemia_chronicMyelogenousK-56210413.2
Leukemia_promyelocytic-HL-609901.8
Leukemialymphoblastic(MOLT-4)8250.9
Liver2624.5
Lung5112.75
Lymphnode8456.1
Lymphoma_burkitts(Daudi)15765.1
Lymphoma_burkitts(Raji)9571.2
MedullaOblongata1777.1
OccipitalLobe1590.5
OlfactoryBulb3111.85
Ovary7086.5
Pancreas5518.4
PancreaticIslet8326.4
ParietalLobe1819.2
Pituitary4438.8
Placenta4825.65
Pons1572.05
PrefrontalCortex2571.25
Prostate4854.2
Salivarygland5368.9
SkeletalMuscle1539.05
Skin4053.5
SmoothMuscle8663.6
Spinalcord4125.9
SubthalamicNucleus1426.1
SuperiorCervicalGanglion1080.85
TemporalLobe1879.95
Testis3411.4
TestisGermCell3064.75
TestisIntersitial3333.3
TestisLeydigCell2478.65
TestisSeminiferousTubule2082.4
Thalamus3404.15
Thymus6268.7
Thyroid5199.3
Tongue4610.9
Tonsil7104.4
Trachea4654.3
TrigeminalGanglion1324.6
Uterus4773.45
UterusCorpus5875.5
WholeBlood7901.35
Wholebrain2205.4
colon3973.25
pineal_day4685.18
pineal_night4076.22
retina5066.875
small_intestine3993.85
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_536_PI417507815
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala13.87 ± 0.26
Basal Forebrain14.27 ± 0.17
Basal Part of Pons13.85 ± 0.17
Cerebellar Cortex13.89 ± 0.19
Cerebellar Nuclei14.1 ± 0.47
Claustrum13.83 ± 0.42
Epithalamus13.89 ± 0.45
Frontal Lobe13.9 ± 0.32
Globus Pallidus15.12 ± 0.17
Hypothalamus14.07 ± 0.35
Insula14.01 ± 0.25
Limbic Lobe13.73 ± 0.39
Mesencephalon14.08 ± 0.45
Myelencephalon13.95 ± 0.38
Occipital Lobe13.64 ± 0.37
Parietal Lobe13.94 ± 0.33
Pontine Tegmentum14.01 ± 0.38
Striatum14.21 ± 0.3
Subthalamus14.07 ± 0.3
Temporal Lobe13.93 ± 0.33
Thalamus14.09 ± 0.32
White Matter15 ± 0.47
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rps12CBCerebellum2.93
3.9
Rps12CTXCerebral cortex12.54
8.99
Rps12HIPHippocampal region29.91
43.26
Rps12HPFHippocampal formation25.96
29.14
Rps12HYHypothalamus31.45
30.46
Rps12LSXLateral septal complex19.4
16.92
Rps12MBMidbrain28.16
29.07
Rps12MYMedulla25.73
34.17
Rps12OLFOlfactory bulb18.21
13.23
Rps12PPons31.09
36.26
Rps12PALPallidum23.7
23.87
Rps12RHPRetrohippocampal region22.58
17.39
Rps12sAMYStriatum-like amygdalar nuclei31.08
25.79
Rps12STRStriatum11.26
10.45
Rps12STRdStriatum dorsal region7.33
7.61
Rps12STRvStriatum ventral region11.28
8.64
Rps12THThalamus13.15
12.19
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00004440 10 84 93 KLGEWVGLCK Peptide Atlas
RS12_HUMAN_1 32 1 32 AEEGIAAGGVMDVNTALQEVLKTALIHDGLAR PRIDE
RS12_HUMAN_101 11 101 111 KVVGCSCVVVK PRIDE
RS12_HUMAN_101 15 101 115 KVVGCSCVVVKDYGK PRIDE
RS12_HUMAN_11 22 11 32 MDVNTALQEVLKTALIHDGLAR PRIDE
RS12_HUMAN_12 21 12 32 DVNTALQEVLKTALIHDGLAR PRIDE
RS12_HUMAN_121 8 121 128 DVIEEYFK PRIDE
RS12_HUMAN_15 18 15 32 TALQEVLKTALIHDGLAR PRIDE
RS12_HUMAN_22 11 22 32 KTALIHDGLAR PRIDE
RS12_HUMAN_23 10 23 32 TALIHDGLAR PRIDE
RS12_HUMAN_37 8 37 44 AAKALDKR PRIDE
RS12_HUMAN_83 10 83 92 KLGEWVGLCK PRIDE
RS12_HUMAN_84 9 84 92 LGEWVGLCK PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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