AutismKB 2.0

Annotation Detail for RPS19


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Basic Information Top
Gene Symbol:RPS19 ( DBA,DBA1 )
Gene Full Name: ribosomal protein S19
Band: 19q13.2
Quick LinksEntrez ID:6223; OMIM: 603474; Uniprot ID:RS19_HUMAN; ENSEMBL ID: ENSG00000105372; HGNC ID: 10402
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body37 / 70761522
blastocyst60 / 62319962
fetus214 / 564012379
neonate20 / 31097643
infant2 / 2362084
juvenile16 / 55556287
adult949 / 1939121489
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor3 / 12794234
bladder carcinoma14 / 17475801
breast (mammary gland) tumor32 / 94178339
cervical tumor5 / 34366145
chondrosarcoma6 / 8282372
colorectal tumor93 / 114246814
esophageal tumor4 / 17290231
gastrointestinal tumor19 / 119369159
germ cell tumor122 / 263845462
glioma44 / 106883411
head and neck tumor142 / 1363021041
kidney tumor42 / 68959609
leukemia62 / 95842646
liver tumor56 / 96359581
lung tumor46 / 103127446
lymphoma26 / 71755362
non-neoplasia9 / 9725092
normal1360 / 3360307404
ovarian tumor35 / 76682456
pancreatic tumor38 / 104616363
primitive neuroectodermal tumor of the CNS56 / 125680445
prostate cancer126 / 1026801227
retinoblastoma13 / 46356280
skin tumor51 / 124949408
soft tissue/muscle tissue tumor41 / 125191327
uterine tumor10 / 90257110
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue9 / 13106686
adrenal gland9 / 33197271
ascites6 / 40015149
bladder17 / 29757571
blood53 / 123478429
bone19 / 71655265
bone marrow48 / 48801983
brain223 / 1100989202
cervix5 / 48171103
connective tissue13 / 14925587
ear0 / 162120 
embryonic tissue179 / 215722829
esophagus4 / 20209197
eye41 / 211054194
heart72 / 89626803
intestine200 / 234472852
kidney122 / 211777576
larynx3 / 24145124
liver128 / 207743616
lung124 / 336974367
lymph17 / 44270384
lymph node17 / 91610185
mammary gland53 / 153271345
mouth10 / 67052149
muscle72 / 107715668
nerve1 / 1576863
ovary60 / 102051587
pancreas62 / 214812288
parathyroid3 / 20539146
pharynx132 / 413283193
pituitary gland13 / 16585783
placenta30 / 280825106
prostate233 / 1893451230
salivary gland12 / 20155595
skin77 / 210574365
spleen19 / 53952352
stomach21 / 96619217
testis62 / 330442187
thymus14 / 81131172
thyroid5 / 47473105
tonsil9 / 16999529
trachea2 / 5241338
umbilical cord17 / 136801242
uterus42 / 232878180
vascular48 / 51780926
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 213414_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts8344.4
Adipocyte5013.5
AdrenalCortex3314.25
Adrenalgland1793.7
Amygdala1088.3
Appendix3934.55
AtrioventricularNode844.1
BDCA4+_DentriticCells8110.25
Bonemarrow2658.8
BronchialEpithelialCells8900.6
CD105+_Endothelial6805.2
CD14+_Monocytes6226.75
CD19+_BCells(neg._sel.)9418.2
CD33+_Myeloid5603.3
CD34+9727.9
CD4+_Tcells9257.15
CD56+_NKCells8792.9
CD71+_EarlyErythroid2739.4
CD8+_Tcells9060.55
CardiacMyocytes5764.95
Caudatenucleus1051
Cerebellum655.8
CerebellumPeduncles1419.9
CiliaryGanglion556.45
CingulateCortex715.4
Colorectaladenocarcinoma9935.65
DorsalRootGanglion706
FetalThyroid4894
Fetalbrain3516.5
Fetalliver1333.8
Fetallung4306.05
GlobusPallidus422
Heart5095.2
Hypothalamus1472.7
Kidney799.65
Leukemia_chronicMyelogenousK-5625977.5
Leukemia_promyelocytic-HL-607501.7
Leukemialymphoblastic(MOLT-4)4993.4
Liver5155.3
Lung7767.8
Lymphnode5316.8
Lymphoma_burkitts(Daudi)13672.8
Lymphoma_burkitts(Raji)15439.65
MedullaOblongata1074.9
OccipitalLobe858.45
OlfactoryBulb1548.65
Ovary3852.7
Pancreas4258.25
PancreaticIslet4481.35
ParietalLobe607.3
Pituitary1943.25
Placenta2661.75
Pons856.5
PrefrontalCortex1853.75
Prostate7245.1
Salivarygland3010.25
SkeletalMuscle1548.45
Skin2100
SmoothMuscle8583.05
Spinalcord1655.7
SubthalamicNucleus672.25
SuperiorCervicalGanglion560.4
TemporalLobe1212.85
Testis2246.45
TestisGermCell2484.25
TestisIntersitial1596
TestisLeydigCell1670.95
TestisSeminiferousTubule2575.6
Thalamus1083.8
Thymus5173.35
Thyroid4081.4
Tongue4225.25
Tonsil5587.9
Trachea1363.9
TrigeminalGanglion1081.15
Uterus6467.2
UterusCorpus4318.25
WholeBlood6372.3
Wholebrain2550.2
colon5645.15
pineal_day2410.98
pineal_night2035.32
retina2577.775
small_intestine5577.75
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P119130
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala11.39 ± 0.41
Basal Forebrain11.84 ± 0.09
Basal Part of Pons11.35 ± 0.47
Cerebellar Cortex11.33 ± 0.29
Cerebellar Nuclei11.41 ± 0.45
Claustrum10.81 ± 0.5
Epithalamus11.51 ± 0.31
Frontal Lobe11.34 ± 0.38
Globus Pallidus12.31 ± 0.28
Hypothalamus11.6 ± 0.37
Insula11.42 ± 0.31
Limbic Lobe11.17 ± 0.35
Mesencephalon11.43 ± 0.48
Myelencephalon11.37 ± 0.36
Occipital Lobe11.04 ± 0.31
Parietal Lobe11.28 ± 0.38
Pontine Tegmentum11.4 ± 0.37
Striatum11.79 ± 0.35
Subthalamus11.25 ± 0.5
Temporal Lobe11.4 ± 0.34
Thalamus11.3 ± 0.31
White Matter12.04 ± 0.58
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rps19CBCerebellum13.36
15.43
Rps19CTXCerebral cortex56.96
47.11
Rps19HIPHippocampal region72.23
97.91
Rps19HPFHippocampal formation71
92.71
Rps19HYHypothalamus56.54
58.4
Rps19LSXLateral septal complex32.69
28.37
Rps19MBMidbrain41.2
44.29
Rps19MYMedulla38.08
49.61
Rps19OLFOlfactory bulb54.02
47.41
Rps19PPons43.08
51.85
Rps19PALPallidum40.37
43.72
Rps19RHPRetrohippocampal region75.05
70.23
Rps19sAMYStriatum-like amygdalar nuclei79.89
73.53
Rps19STRStriatum36.57
30.98
Rps19STRdStriatum dorsal region30.81
25.71
Rps19STRvStriatum ventral region35.15
26.24
Rps19THThalamus31.19
30.97
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00033299 9 8 16 DVNQQEFVR Peptide Atlas
RS19_HUMAN_0 0 0 0 DVNQQEFVR PRIDE
RS19_HUMAN_0 0 0 0 VLQALEGLK PRIDE
RS19_HUMAN_1 15 1 15 PGVTVKDVNQQEFVR PRIDE
RS19_HUMAN_1 16 1 16 MPGVTVKDVNQQEFVR PRIDE
RS19_HUMAN_101 10 101 110 RVLQALEGLK PRIDE
RS19_HUMAN_102 9 102 110 VLQALEGLK PRIDE
RS19_HUMAN_133 10 133 142 IAGQVAAANK PRIDE
RS19_HUMAN_133 12 133 144 IAGQVAAANKKH PRIDE
RS19_HUMAN_134 11 134 144 AGQVAAANKKH PRIDE
RS19_HUMAN_16 8 16 23 ALAAFLKK PRIDE
RS19_HUMAN_2 15 2 16 PGVTVKDVNQQEFVR PRIDE
RS19_HUMAN_27 11 27 37 LKVPEWVDTVK PRIDE
RS19_HUMAN_29 9 29 37 VPEWVDTVK PRIDE
RS19_HUMAN_41 15 41 55 HKELAPYDENWFYTR PRIDE
RS19_HUMAN_43 13 43 55 ELAPYDENWFYTR PRIDE
RS19_HUMAN_7 9 7 15 DVNQQEFVR PRIDE
RS19_HUMAN_82 12 82 93 QRNGVMPSHFSR PRIDE
RS19_HUMAN_84 10 84 93 NGVMPSHFSR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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